RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
TROAP-215ENST00000551245 USP1O94782 785 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 INHBAP08476 426 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 POU2F2P09086 479 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 IRF1P10914 325 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 HOXD9P28356 352 aaPredicted RBP11.82□□□□□ -0.52
TROAP-215ENST00000551245 RPS24P62847 133 aaKnown RBP11.82□□□□□ -0.52
TROAP-215ENST00000551245 NIPAL4Q0D2K0 466 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 ZNF177Q13360 481 aaPredicted RBP11.82□□□□□ -0.52
TROAP-215ENST00000551245 OLIG2Q13516 323 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
TROAP-215ENST00000551245 SLC14A2Q15849 920 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 DENND5AQ6IQ26 1287 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 RANBP10Q6VN20 620 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 MARK2Q7KZI7 788 aaKnown RBP11.82□□□□□ -0.52
TROAP-215ENST00000551245 GCNAQ96QF7 691 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 ASAH2Q9NR71 780 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 CPQQ9Y646 472 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 IKBKGQ9Y6K9 419 aa11.82□□□□□ -0.52
TROAP-215ENST00000551245 MYLKQ15746 1914 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 TRAV19A0A0A6YYK7 116 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 USP12O75317 370 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 KRT15P19012 456 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 DDX6P26196 483 aaKnown RBP eCLIP11.81□□□□□ -0.52
TROAP-215ENST00000551245 ETFBP38117 255 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 SGSHP51688 502 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 IRX1P78414 480 aaPredicted RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 CRADDP78560 199 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 ZXDBP98169 803 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 RNF43Q68DV7 783 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 CASC4Q6P4E1 433 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 TRMT10BQ6PF06 316 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 DNAAF3Q8N9W5 541 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 HJURPQ8NCD3 748 aaPredicted RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 ALKBH8Q96BT7 664 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 MRGPRX2Q96LB1 330 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 MAGEB18Q96M61 343 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 KIFC1Q9BW19 673 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 PITPNM3Q9BZ71 974 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 KIF9Q9HAQ2 790 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 SOX13Q9UN79 622 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 SMG5Q9UPR3 1016 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 UNC5CO95185 931 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 MT-CYBP00156 380 aaPredicted RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 MMP2P08253 660 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 HNRNPA1P09651 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
TROAP-215ENST00000551245 SERPINB9P50453 376 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 CYP4F8P98187 520 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 RFTN1Q14699 578 aaPredicted RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 CPXM2Q8N436 756 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 ARRDC2Q8TBH0 407 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 TRIM56Q9BRZ2 755 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 FAM167BQ9BTA0 163 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 MRM3Q9HC36 420 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 NT5MQ9NPB1 228 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 NKIRAS1Q9NYS0 192 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 LSM7Q9UK45 103 aaKnown RBP11.81□□□□□ -0.52
TROAP-215ENST00000551245 ATG2AQ2TAZ0 1938 aa11.81□□□□□ -0.52
TROAP-215ENST00000551245 GRM6O15303 877 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CLASP2O75122 1294 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 ARHGEF15O94989 841 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CNTFP26441 200 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PEX19P40855 299 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CCNG1P51959 295 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 TAF11Q15544 211 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CERCAMQ5T4B2 595 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 LGSNQ5TDP6 509 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CXorf57Q6NSI4 855 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 POTEHQ6S545 545 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PGBD5Q8N414 524 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PPM1NQ8N819 430 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 LEMD2Q8NC56 503 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PABPC5Q96DU9 382 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 MTBPQ96DY7 904 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 RAB3IPQ96QF0 476 aaPredicted RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 SMC6Q96SB8 1091 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PAIP2Q9BPZ3 127 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 ATXN3LQ9H3M9 355 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PIH1D1Q9NWS0 290 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 CORO1CQ9ULV4 474 aaPredicted RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 A0A0D9SEW6 157 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 ZCWPW2A0A1B0GU75 182 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 FAM47DPA6NHR8 397 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 CCL16O15467 120 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 TYROBPO43914 113 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 RHOCP08134 193 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PTPN2P17706 415 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 FOXN2P32314 431 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 SKIV2L2P42285 1042 aaKnown RBP11.8□□□□□ -0.52
TROAP-215ENST00000551245 BLMHQ13867 455 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 ANKRD20A4Q4UJ75 823 aa11.8□□□□□ -0.52
TROAP-215ENST00000551245 PCID2Q5JVF3 399 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms