RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FAM43BQ6ZT52 329 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 RBM23Q86U06 439 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 AOPEPQ8N6M6 819 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 MRPL43Q8N983 215 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 C3orf20Q8ND61 904 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 ACTRT2Q8TDY3 377 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 SNX21Q969T3 373 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 DNAJC19Q96DA6 116 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF558Q96NG5 402 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 REEP2Q9BRK0 252 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 BRINP2Q9C0B6 783 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 POMKQ9H5K3 350 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 INTS13Q9NVM9 706 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
SCAF11-214ENST00000550893 TLK1Q9UKI8 766 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 NEU2Q9Y3R4 380 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 PCDHA3Q9Y5H8 950 aa5.29□□□□□ -1.56
SCAF11-214ENST00000550893 PHLPP2Q6ZVD8 1323 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 OTOGLQ3ZCN5 2332 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 VWA3AA6NCI4 1184 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 LRRIQ4A6NIV6 560 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PI4K2BG5E9Z4 385 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 INO80B-WBP1J3KQ70 363 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ACKR2O00590 384 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PEX1O43933 1283 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 TBC1D4O60343 1298 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PIGRP01833 764 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PRKCBP05771 671 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ADRB2P07550 413 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CNPP09543 421 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 TNFSF9P41273 254 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ANXA11P50995 505 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CLCN4P51793 760 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PIGFQ07326 219 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 GIT2Q14161 759 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 MXD4Q14582 209 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 RILPL1Q5EBL4 403 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 GLRA4Q5JXX5 417 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF362Q5T0B9 420 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ARL6IP4Q66PJ3 421 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 VWA1Q6PCB0 445 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 SLC27A1Q6PCB7 646 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ADHFE1Q8IWW8 467 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ADGRG5Q8IZF4 528 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PRR18Q8N4B5 295 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CPA6Q8N4T0 437 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 SYT2Q8N9I0 419 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 FAM98AQ8NCA5 519 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 MCPH1Q8NEM0 835 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 SLC30A5Q8TAD4 765 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 NTN5Q8WTR8 489 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 TNPO1Q92973 898 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CCDC51Q96ER9 411 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PDLIM2Q96JY6 352 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 SNX27Q96L92 541 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PLIN2Q99541 437 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 ACO2Q99798 780 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 NTPCRQ9BSD7 190 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 LRFN3Q9BTN0 628 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 INO80BQ9C086 356 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 SPG21Q9NZD8 308 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PTGFRNQ9P2B2 879 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 LRWD1Q9UFC0 647 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 POLHQ9Y253 713 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 PRG3Q9Y2Y8 225 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 LUC7L2Q9Y383 392 aaKnown RBP5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CACNA1IQ9P0X4 2223 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 GPR179Q6PRD1 2367 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 CACNA1AO00555 2505 aa5.28□□□□□ -1.56
SCAF11-214ENST00000550893 WDFY3Q8IZQ1 3526 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PTPRJQ12913 1337 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 F5P12259 2224 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CASTOR2A6NHX0 329 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 MYMKA6NI61 221 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 C2CD4DB7Z1M9 353 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ANKRD63C9JTQ0 380 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TMEM189-UBE2V1I3L0A0 370 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 I3L4J1 428 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 LAD1O00515 517 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TOR1BO14657 336 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SLC16A4O15374 487 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 YY2O15391 372 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TEX28O15482 410 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ASAP2O43150 1006 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 RFPL2O75678 378 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PDGFBP01127 241 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 POU2F2P09086 479 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PLA2G4BP0C869 781 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 MARCKSP29966 332 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ADSSP30520 456 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms