RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CRYMQ14894 314 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 TEAD2Q15562 447 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 HP1BP3Q5SSJ5 553 aaPredicted RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SYCP2LQ5T4T6 812 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 RNF219Q5W0B1 726 aaPredicted RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 KDELC1Q6UW63 502 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 RANBP10Q6VN20 620 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 TMEM184AQ6ZMB5 413 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 MARK2Q7KZI7 788 aaKnown RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 OTOP3Q7RTS5 596 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 IGDCC3Q8IVU1 814 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 CARNMT1Q8N4J0 409 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 IPMKQ8NFU5 416 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 ARNTL2Q8WYA1 636 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 CENPTQ96BT3 561 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 MYEOVQ96EZ4 313 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 FEM1CQ96JP0 617 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 KIFC1Q9BW19 673 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 MRPS23Q9Y3D9 190 aaKnown RBP12.75□□□□□ -0.37
CACNB3-217ENST00000550483 FAM169AQ9Y6X4 670 aa12.75□□□□□ -0.37
CACNB3-217ENST00000550483 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 HEATR9A2RTY3 570 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 TSPAN3O60637 253 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 FGF1P05230 155 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 ALADP13716 330 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 ADRA1DP25100 572 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 CCR2P41597 374 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 GRIA1P42261 906 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 TMED2Q15363 201 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 ZNF77Q15935 545 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 KBTBD12Q3ZCT8 623 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 UBAP2Q5T6F2 1119 aaKnown RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
CACNB3-217ENST00000550483 OR7D4Q8NG98 312 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 ARRDC2Q8TBH0 407 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 SMC6Q96SB8 1091 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 RIMKLBQ9ULI2 386 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
CACNB3-217ENST00000550483 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 CBX4O00257 560 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 RFXAPO00287 272 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 MT-CYBP00156 380 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 PENKP01210 267 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 SNRPAP09012 282 aaKnown RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 GCAP28676 217 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 MDH1P40925 334 aaKnown RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 CD86P42081 329 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 CSNK1DP48730 415 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 ZXDBP98169 803 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 KCNC3Q14003 757 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 TERF2Q15554 542 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 UGP2Q16851 508 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
CACNB3-217ENST00000550483 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 SPATA22Q8NHS9 363 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 DCAKDQ8WVC6 231 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 WBP2Q969T9 261 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 CERS2Q96G23 380 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CACNB3-217ENST00000550483 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms