RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 MAGEH1Q9H213 219 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 RAI2Q9Y5P3 530 aa23.48■■□□□ 1.35
SMARCD1-209ENST00000550477 POM121BA6NF01 834 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 USP12O75317 370 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 POP4O95707 220 aaKnown RBP23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 NME1P15531 152 aaKnown RBP23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 LSSP48449 732 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 ARF5P84085 180 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 FZD2Q14332 565 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF805Q5CZA5 627 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 MIIPQ5JXC2 388 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 NAA35Q5VZE5 725 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 BNIPLQ7Z465 357 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 DENND6BQ8NEG7 585 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 IFI44Q8TCB0 444 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 C1QTNF7Q9BXJ2 289 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 C1QTNF2Q9BXJ5 285 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 OSBPL1AQ9BXW6 950 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 TM6SF2Q9BZW4 377 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 POLR1BQ9H9Y6 1135 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 SALL4Q9UJQ4 1053 aa23.47■■□□□ 1.35
SMARCD1-209ENST00000550477 C16orf96A6NNT2 1141 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 AQP9O43315 295 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 CSO75390 466 aaKnown RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 GIMD1P0DJR0 217 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 RHOQP17081 205 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 JUNDP17535 347 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 ADRA1BP35368 520 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 RPIAP49247 311 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 THOP1P52888 689 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 ERVPABLB-1P60509 514 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 NOMO3P69849 1222 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 CXADRP78310 365 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 GABREP78334 506 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 NRG1Q02297 640 aaPredicted RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 TLE3Q04726 772 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 CDO1Q16878 200 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 C2CD6Q53TS8 623 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 HSP90AA4PQ58FG1 418 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 CT47A1Q5JQC4 288 aaPredicted RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 PARS2Q7L3T8 475 aaKnown RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 NOP9Q86U38 636 aaKnown RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF354CQ86Y25 554 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 SPACA3Q8IXA5 215 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF548Q8NEK5 533 aaPredicted RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 OR2AP1Q8NGE2 309 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 METTL5Q9NRN9 209 aaKnown RBP23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 THSD1Q9NS62 852 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 GPR27Q9NS67 375 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 SPASTQ9UBP0 616 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 ZNF212Q9UDV6 495 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 PCDHB1Q9Y5F3 818 aa23.46■■□□□ 1.35
SMARCD1-209ENST00000550477 PTPRQQ9UMZ3 2332 aa23.45■■□□□ 1.35
SMARCD1-209ENST00000550477 CPED1A4D0V7 1026 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 ZSCAN5CA6NGD5 496 aaPredicted RBP23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 IGLON5A6NGN9 336 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 KRIT1O00522 736 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 TPP1O14773 563 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 NEBLO76041 1014 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 GSRP00390 522 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 MPOP05164 745 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 MMEP08473 750 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 EEF1GP26641 437 aaKnown RBP23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 FGL2Q14314 439 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 NAA15Q9BXJ9 866 aaKnown RBP23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 DNAI1Q9UI46 699 aa23.45■■□□□ 1.34
SMARCD1-209ENST00000550477 F8VZ95 297 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 RNF103O00237 685 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 TOR1BO14657 336 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 RAMP2O60895 175 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 DXOO77932 396 aaKnown RBP23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 RBMS1P29558 406 aaKnown RBP23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 TMPRSS3P57727 454 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 DPY19L2P1Q6NXN4 242 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 STRADAQ7RTN6 431 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 TTC7BQ86TV6 843 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 EMC1Q8N766 993 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 WDR48Q8TAF3 677 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 LMX1AQ8TE12 382 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 EPS8L1Q8TE68 723 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 RXFP2Q8WXD0 754 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 ARHGEF2Q92974 986 aaKnown RBP23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 TBC1D31Q96DN5 1066 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 CLSTN2Q9H4D0 955 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 TMEM248Q9NWD8 314 aa23.44■■□□□ 1.34
SMARCD1-209ENST00000550477 FAM170AA1A519 330 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 ACVRL1P37023 503 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 NR0B2Q15466 257 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 CDKN3Q16667 212 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 MYLK3Q32MK0 819 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 TRIM72Q6ZMU5 477 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 CXorf40AQ8TE69 158 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 KCNE4Q8WWG9 221 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 CASKIN2Q8WXE0 1202 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 CCDC97Q96F63 343 aaPredicted RBP23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 NAF1Q96HR8 494 aaKnown RBP23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 SLC13A1Q9BZW2 595 aa23.43■■□□□ 1.34
SMARCD1-209ENST00000550477 RAD51BO15315 384 aa23.42■■□□□ 1.34
SMARCD1-209ENST00000550477 UGT2B4P06133 528 aa23.42■■□□□ 1.34
SMARCD1-209ENST00000550477 PTPN9P43378 593 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms