RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 LDB1Q86U70 411 aaPredicted RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 C10orf107Q8IVU9 208 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 PPHLN1Q8NEY8 458 aaKnown RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 NSMCE3Q96MG7 304 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 LRRC37BQ96QE4 947 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 SMIM14Q96QK8 99 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 ZNF334Q9HCZ1 680 aaPredicted RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 SIRPGQ9P1W8 387 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 CPSF2Q9P2I0 782 aaKnown RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 AGO1Q9UL18 857 aaKnown RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 TEX28O15482 410 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 PLIN3O60664 434 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 SLC11A2P49281 568 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 ZNF789Q5FWF6 425 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 MFSD6LQ8IWD5 586 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 NSMCE1Q8WV22 266 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 OXCT2Q9BYC2 517 aaPredicted RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 ACTR5Q9H9F9 607 aaPredicted RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 RC3H2Q9HBD1 1191 aaKnown RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 FBXO6Q9NRD1 293 aaPredicted RBP21.21■□□□□ 0.99
PRDM4-205ENST00000550376 COMMD8Q9NX08 183 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 SPG21Q9NZD8 308 aa21.21■□□□□ 0.99
PRDM4-205ENST00000550376 MYLKQ15746 1914 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ABHD14A-ACY1A0A1B0GW23 586 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ZBBXA8MT70 800 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 URODP06132 367 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 NCALDP61601 193 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 KCNJ2P63252 427 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 BNIP1Q12981 228 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 NAB1Q13506 487 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 GALNT3Q14435 633 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 TRIM55Q9BYV6 548 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 MKS1Q9NXB0 559 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 H3BNC9 293 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 NRG2O14511 850 aaPredicted RBP21.2■□□□□ 0.98
PRDM4-205ENST00000550376 TIMP1P01033 207 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 C2P06681 752 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 TROVE2P10155 538 aaKnown RBP eCLIP21.2■□□□□ 0.98
PRDM4-205ENST00000550376 TARSP26639 723 aaKnown RBP21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ELF1P32519 619 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 RGRP47804 291 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 IL10RBQ08334 325 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 PARP15Q460N3 678 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 SIRPB2Q5JXA9 342 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ZNF449Q6P9G9 518 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 RAPH1Q70E73 1250 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ZC3HC1Q86WB0 502 aaKnown RBP21.2■□□□□ 0.98
PRDM4-205ENST00000550376 SLC41A1Q8IVJ1 513 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 ARID3BQ8IVW6 561 aaPredicted RBP21.2■□□□□ 0.98
PRDM4-205ENST00000550376 PPP1R14CQ8TAE6 165 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 C11orf49Q9H6J7 331 aa21.2■□□□□ 0.98
PRDM4-205ENST00000550376 OR51F1A6NGY5 319 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 PRAMEF11O60813 436 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 DLDP09622 509 aaKnown RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 GLRBP48167 497 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 KPNA1P52294 538 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 GNA12Q03113 381 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 PDPK2PQ6A1A2 396 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 ZNF470Q6ECI4 717 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 TEX26Q8N6G2 289 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 ARL14EPQ8N8R7 260 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 TMEM237Q96Q45 408 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 TMEM120AQ9BXJ8 343 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 SUDS3Q9H7L9 328 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 SLC40A1Q9NP59 571 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 HEY2Q9UBP5 337 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 DCDC2Q9UHG0 476 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 UNC80Q8N2C7 3258 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 CHD9Q3L8U1 2897 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 GLRA3O75311 464 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 HAUS5O94927 633 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 CBX6O95503 412 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 GJA1P17302 382 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 HOXD9P28356 352 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 SLC1A2P43004 574 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 ZNF235Q14590 738 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 HSF5Q4G112 596 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 TAF1BQ53T94 588 aaPredicted RBP21.19■□□□□ 0.98
PRDM4-205ENST00000550376 C1orf53Q5VUE5 145 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 LINGO4Q6UY18 593 aa21.19■□□□□ 0.98
PRDM4-205ENST00000550376 CBX4O00257 560 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 PROCP04070 461 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 MYL2P10916 166 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 MBL2P11226 248 aaPredicted RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 ARRB2P32121 409 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 SERPINH1P50454 418 aaKnown RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 USP10Q14694 798 aaKnown RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 PCLAFQ15004 111 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 POTEHQ6S545 545 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 ACMSDQ8TDX5 336 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 MCMBPQ9BTE3 642 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 TREX1Q9NSU2 369 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 FNIP2Q9P278 1114 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 HAO1Q9UJM8 370 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 SERPINB8P50452 374 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 ARSDP51689 593 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 ARFIP2P53365 341 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 STX3Q13277 289 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 SETDB1Q15047 1291 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 FSCBQ5H9T9 825 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms