RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CTSLP07711 333 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 GLDCP23378 1020 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 RFC1P35251 1148 aaPredicted RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 RPL7AP62424 266 aaKnown RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 CYP4F3Q08477 520 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 BNIP3Q12983 259 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 STAT4Q14765 748 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 C22orf39Q6P5X5 142 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 TRIM69Q86WT6 500 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 OXR1Q8N573 874 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 DCAF4L2Q8NA75 395 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 OR7D4Q8NG98 312 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 SLC35G2Q8TBE7 412 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 FNIP1Q8TF40 1166 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 NT5C3BQ969T7 300 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
NUP188-211ENST00000550219 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 SPON2Q9BUD6 331 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 KDM4CQ9H3R0 1056 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 SALL4Q9UJQ4 1053 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 DMTF1Q9Y222 760 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 HS3ST2Q9Y278 367 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 GPSM3Q9Y4H4 160 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 DUSP10Q9Y6W6 482 aa13.69□□□□□ -0.22
NUP188-211ENST00000550219 SPEGQ15772 3267 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 A0A1W2PQU0 124 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 TRABD2BA6NFA1 517 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 SLC31A1O15431 190 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 SMAD6O43541 496 aaKnown RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 F9P00740 461 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 OR1E1P30953 314 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 CHRNA3P32297 505 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 RECQLP46063 649 aaPredicted RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 TAS2R38P59533 333 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 ATP11AP98196 1134 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 SMAD1Q15797 465 aaKnown RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 CDO1Q16878 200 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 PIP5KL1Q5T9C9 394 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 BNIPLQ7Z465 357 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 ZNF683Q8IZ20 524 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 EMC1Q8N766 993 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 MFSD2AQ8NA29 543 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 CHST14Q8NCH0 376 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 HNRNPLLQ8WVV9 542 aaKnown RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 FAM131CQ96AQ9 280 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 TRIM7Q9C029 511 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 PREBQ9HCU5 417 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
NUP188-211ENST00000550219 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
NUP188-211ENST00000550219 WDFY3Q8IZQ1 3526 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 PRAMEF26H0Y7S4 382 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 RNF103O00237 685 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 KRT86O43790 486 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 MAGEC1O60732 1142 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 PCDH8O95206 1070 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 DEKP35659 375 aaKnown RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 HNF1BP35680 557 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 NUDT1P36639 197 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 PTPN9P43378 593 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 ACADVLP49748 655 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 DNA2P51530 1060 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 OGDHQ02218 1023 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 HES3Q5TGS1 186 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 SETD3Q86TU7 594 aaPredicted RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 NIPA2Q8N8Q9 360 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 OR2A12Q8NGT7 310 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 CENPIQ92674 756 aaPredicted RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
NUP188-211ENST00000550219 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 CALN1Q9BXU9 219 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 ATP13A1Q9HD20 1204 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 TRIM10Q9UDY6 481 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 IL36AQ9UHA7 158 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
NUP188-211ENST00000550219 PRNPP04156 253 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 THEGLP0DJG4 465 aa13.66□□□□□ -0.22
NUP188-211ENST00000550219 JUPP14923 745 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms