RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 OR1E1P30953 314 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 GGCXP38435 758 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 RPIAP49247 311 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 PFN3P60673 137 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 PTK2Q05397 1052 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 SGCGQ13326 291 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 MORC3Q14149 939 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 LY6DQ14210 128 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 ARL13BQ3SXY8 428 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 CARD16Q5EG05 197 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 OTUD1Q5VV17 481 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 KLHL10Q6JEL2 608 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 RETSATQ6NUM9 610 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 GUSBP11Q6P575 273 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 C22orf39Q6P5X5 142 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 TRIM65Q6PJ69 517 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 LINGO4Q6UY18 593 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 EFL1Q7Z2Z2 1120 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 CLEC14AQ86T13 490 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 GLMNQ92990 594 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 ISG20Q96AZ6 181 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 ATXN7L3BQ96GX2 97 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 HEPHQ9BQS7 1158 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 BOCQ9BWV1 1114 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 ZNF212Q9UDV6 495 aa10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 IPO11Q9UI26 975 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-207ENST00000550051 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 IGLON5A6NGN9 336 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 LMO7DNF2Z398 122 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SPINT1O43278 529 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 JUNDP17535 347 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 TFE3P19532 575 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC9A1P19634 815 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 KRT9P35527 623 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SCNN1AP37088 669 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 USP8P40818 1118 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SERPINH1P50454 418 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 YPEL5P62699 121 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 KCNC4Q03721 635 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 DEUP1Q05D60 604 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 PDE1CQ14123 709 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 NR0B2Q15466 257 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 ARHGAP44Q17R89 818 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC25A52Q3SY17 297 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 C3orf38Q5JPI3 329 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 GJB7Q6PEY0 223 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 CCDC81Q6ZN84 652 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 ARL14Q8N4G2 192 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 DENND6BQ8NEG7 585 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 OR7D4Q8NG98 312 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 WDR36Q8NI36 951 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 NAT6Q93015 286 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 CENPTQ96BT3 561 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 IL12RB2Q99665 862 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 CLMPQ9H6B4 373 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 RETREG1Q9H6L5 497 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 MPP6Q9NZW5 540 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 APEX2Q9UBZ4 518 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 STAP1Q9ULZ2 295 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 MYO18BQ8IUG5 2567 aa10.03□□□□□ -0.8
TRAFD1-207ENST00000550051 CCDC187A0A096LP49 1063 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 FOXN3O00409 490 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 TOR1BO14657 336 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 EFSO43281 561 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 GCATO75600 419 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 ENDOD1O94919 500 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 WISP1O95388 367 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CD160O95971 181 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 PON1P27169 355 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CDH5P33151 784 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CLCN1P35523 988 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 GABRB2P47870 512 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CCNHP51946 323 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 ARF5P84085 180 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 GNA12Q03113 381 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 PAK1Q13153 545 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 CLN3Q13286 438 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 PTK2BQ14289 1009 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 DEFB133Q30KQ1 61 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 ZNF805Q5CZA5 627 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 TPRG1LQ5T0D9 272 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 BNIPLQ7Z465 357 aa10.02□□□□□ -0.81
TRAFD1-207ENST00000550051 TFAP2DQ7Z6R9 452 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms