RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 DEFB133Q30KQ1 61 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 RAB6CQ53S08 254 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 ZCCHC8Q6NZY4 707 aaKnown RBP15.69■□□□□ 0.1
RAB5C-205ENST00000550013 GUSBP11Q6P575 273 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 BNIPLQ7Z465 357 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 PARGQ86W56 976 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 OR6K2Q8NGY2 324 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 HAPLN3Q96S86 360 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 KLF6Q99612 283 aaPredicted RBP15.69■□□□□ 0.1
RAB5C-205ENST00000550013 ZYG11BQ9C0D3 744 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 RAB6CQ9H0N0 254 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 USP29Q9HBJ7 922 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 ASCL3Q9NQ33 180 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 HECAQ9UBI9 543 aaPredicted RBP15.69■□□□□ 0.1
RAB5C-205ENST00000550013 FHOD1Q9Y613 1164 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 COL6A6A6NMZ7 2263 aa15.69■□□□□ 0.1
RAB5C-205ENST00000550013 JUNDP17535 347 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 RABIFP47224 123 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 CFHR1Q03591 330 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 SLC20A2Q08357 652 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 PDE1CQ14123 709 aaPredicted RBP15.68■□□□□ 0.1
RAB5C-205ENST00000550013 MAN2A1Q16706 1144 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 ISXQ2M1V0 245 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 C3orf38Q5JPI3 329 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 ACBD5Q5T8D3 534 aaPredicted RBP15.68■□□□□ 0.1
RAB5C-205ENST00000550013 ARHGAP40Q5TG30 622 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 BROXQ5VW32 411 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 SMYD5Q6GMV2 418 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 CRTC1Q6UUV9 634 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
RAB5C-205ENST00000550013 LSMEM2Q8N112 164 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 LMX1AQ8TE12 382 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 KCNE4Q8WWG9 221 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 C1QTNF2Q9BXJ5 285 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 NDFIP2Q9NV92 336 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 EVA1BQ9NVM1 165 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 IPO11Q9UI26 975 aaKnown RBP15.68■□□□□ 0.1
RAB5C-205ENST00000550013 TMEM59LQ9UK28 342 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 SATB2Q9UPW6 733 aa15.68■□□□□ 0.1
RAB5C-205ENST00000550013 C16orf96A6NNT2 1141 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 H3BM21 787 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 FPGTO14772 594 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 CASC3O15234 703 aaKnown RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 KLK10O43240 276 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 AQP9O43315 295 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 LZTS3O60299 673 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 TMPRSS3P57727 454 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 ERVPABLB-1P60509 514 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 ATP11AP98196 1134 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 EIF2B5Q13144 721 aaKnown RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 SGCGQ13326 291 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 TPD52L1Q16890 204 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 TAF1BQ53T94 588 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 HSP90AA4PQ58FG1 418 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 MIIPQ5JXC2 388 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 LEKR1Q6ZMV7 388 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 ZNF605Q86T29 641 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 NOP9Q86U38 636 aaKnown RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 RBFAQ8N0V3 343 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 RYBPQ8N488 228 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 EMC1Q8N766 993 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 CPA5Q8WXQ8 436 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 VOPP1Q96AW1 172 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 ATXN7L3BQ96GX2 97 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 VCPIP1Q96JH7 1222 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 LENG8Q96PV6 779 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 TCEAL2Q9H3H9 227 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-205ENST00000550013 NDST4Q9H3R1 872 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 CSNK1G3Q9Y6M4 447 aa15.67■□□□□ 0.1
RAB5C-205ENST00000550013 PIEZO2Q9H5I5 2752 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 PMS2P1A4D2B8 440 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 ERVH48-1M5A8F1 160 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 NEMP1O14524 444 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 TSPAN6O43657 245 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
RAB5C-205ENST00000550013 VWA3BQ502W6 1294 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 LRRC73Q5JTD7 316 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 PERM1Q5SV97 790 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 KLHDC7AQ5VTJ3 777 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 NAA35Q5VZE5 725 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.66■□□□□ 0.1
RAB5C-205ENST00000550013 MAGEB5Q9BZ81 275 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 METTL5Q9NRN9 209 aaKnown RBP15.66■□□□□ 0.1
RAB5C-205ENST00000550013 THSD1Q9NS62 852 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 TMEM51Q9NW97 253 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 PPARGC1AQ9UBK2 798 aaKnown RBP15.66■□□□□ 0.1
RAB5C-205ENST00000550013 PNMA8BQ9ULN7 279 aaPredicted RBP15.66■□□□□ 0.1
RAB5C-205ENST00000550013 ENTPD2Q9Y5L3 495 aa15.66■□□□□ 0.1
RAB5C-205ENST00000550013 FAM72CH0Y354 149 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 KRIT1O00522 736 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 MUSKO15146 869 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 GCATO75600 419 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 LSM8O95777 96 aaKnown RBP15.65■□□□□ 0.1
RAB5C-205ENST00000550013 UGT2B4P06133 528 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 MMEP08473 750 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 IGFALSP35858 605 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 UCNP55089 124 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 PFN3P60673 137 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 NOMO3P69849 1222 aa15.65■□□□□ 0.1
RAB5C-205ENST00000550013 C1orf61Q13536 156 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms