RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 HORMAD1Q86X24 394 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 DCP2Q8IU60 420 aaKnown RBP8.66□□□□□ -1.02
TROAP-208ENST00000548817 SH2D3CQ8N5H7 860 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 FAM174AQ8TBP5 190 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 SSC4DQ8WTU2 575 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 KLK6Q92876 244 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 ARRDC3Q96B67 414 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 PPP1R16AQ96I34 528 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 SLC2A13Q96QE2 648 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 MYOCQ99972 504 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 CRACR2AQ9BSW2 395 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 CALN1Q9BXU9 219 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 CUEDC1Q9NWM3 386 aaPredicted RBP8.66□□□□□ -1.02
TROAP-208ENST00000548817 RRN3Q9NYV6 651 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 IPO11Q9UI26 975 aaKnown RBP8.66□□□□□ -1.02
TROAP-208ENST00000548817 SALL4Q9UJQ4 1053 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 SARDHQ9UL12 918 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 CSNK1G3Q9Y6M4 447 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 DOCK9Q9BZ29 2069 aa8.66□□□□□ -1.02
TROAP-208ENST00000548817 PMS2P1A4D2B8 440 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 M0QYT0 321 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 BIN1O00499 593 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PAGE1O75459 146 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 F9P00740 461 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PRLRP16471 622 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 HNRNPA2B1P22626 353 aaKnown RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 CD82P27701 267 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 NOS2P35228 1153 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 RPIAP49247 311 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 DNA2P51530 1060 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PDX1P52945 283 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 METAP1P53582 386 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 POLE2P56282 527 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 BPIFB4P59827 614 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 RNASE9P60153 205 aaKnown RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 PITX1P78337 314 aaPredicted RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 SLC6A3Q01959 620 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 TPD52L1Q16890 204 aaPredicted RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 BRMS1LQ5PSV4 323 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 ACBD5Q5T8D3 534 aaPredicted RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 FHL5Q5TD97 284 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 RETSATQ6NUM9 610 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 ERN2Q76MJ5 926 aaKnown RBP8.65□□□□□ -1.02
TROAP-208ENST00000548817 RAB11FIP2Q7L804 512 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 JAMLQ86YT9 394 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 FBXO39Q8N4B4 442 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 HTR3CQ8WXA8 447 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 FEM1CQ96JP0 617 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 SPON2Q9BUD6 331 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 STRADBQ9C0K7 418 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 WDCPQ9H6R7 721 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 DNAJC28Q9NX36 388 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.65□□□□□ -1.02
TROAP-208ENST00000548817 STAP1Q9ULZ2 295 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 CA5BQ9Y2D0 317 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 HS3ST4Q9Y661 456 aa8.65□□□□□ -1.02
TROAP-208ENST00000548817 RP1P56715 2156 aa8.65□□□□□ -1.03
TROAP-208ENST00000548817 TRPM6Q9BX84 2022 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 A0A1W2PQC6 194 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 CPED1A4D0V7 1026 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 A6NNZ2 444 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 H3BM21 787 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 TPP1O14773 563 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 DAB1O75553 588 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 ADCY5O95622 1261 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 DDAH2O95865 285 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 SRCP12931 536 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 UGT1A5P35504 534 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 MTIF2P46199 727 aaKnown RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 SULT1E1P49888 294 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 CLCN6P51797 869 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 DEUP1Q05D60 604 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 SRSF6Q13247 344 aaKnown RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 SGCGQ13326 291 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 SPIDRQ14159 915 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 NR0B2Q15466 257 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 CDKN3Q16667 212 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 EXOC3L4Q17RC7 722 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 PIP5KL1Q5T9C9 394 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 GUSBP11Q6P575 273 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 TRIM65Q6PJ69 517 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 FAM183BPQ6ZVS7 135 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 PTAR1Q7Z6K3 402 aaPredicted RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 SETD3Q86TU7 594 aaPredicted RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 DTX1Q86Y01 620 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 ZDHHC17Q8IUH5 632 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 MSANTD4Q8NCY6 345 aa8.64□□□□□ -1.03
TROAP-208ENST00000548817 C1orf131Q8NDD1 294 aaKnown RBP8.64□□□□□ -1.03
TROAP-208ENST00000548817 C9orf43Q8TAL5 461 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms