RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 KRT9P35527 623 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 PTK2Q05397 1052 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 EIF2B5Q13144 721 aaKnown RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 PERM1Q5SV97 790 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 FAM102AQ5T9C2 384 aaPredicted RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 BROXQ5VW32 411 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 KIAA1161Q6NSJ0 714 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 ZCCHC8Q6NZY4 707 aaKnown RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 IRF2BP1Q8IU81 584 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 DRC7Q8IY82 874 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 LSMEM2Q8N112 164 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 LMX1AQ8TE12 382 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 TTC9Q92623 222 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 PRR11Q96HE9 360 aaPredicted RBP16.77■□□□□ 0.28
SSH1-208ENST00000548522 DUSP23Q9BVJ7 150 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 ZDHHC6Q9H6R6 413 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 ATP13A1Q9HD20 1204 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 THSD1Q9NS62 852 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 STAP1Q9ULZ2 295 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 HS3ST3A1Q9Y663 406 aa16.77■□□□□ 0.28
SSH1-208ENST00000548522 HECTD1Q9ULT8 2610 aa16.77■□□□□ 0.27
SSH1-208ENST00000548522 BSNQ9UPA5 3926 aa16.77■□□□□ 0.27
SSH1-208ENST00000548522 CYSRT1A8MQ03 144 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 AQP9O43315 295 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 JUNDP17535 347 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 L1CAMP32004 1257 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 ACVRL1P37023 503 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 RABIFP47224 123 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 PDX1P52945 283 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 RHDQ02161 417 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 CARD16Q5EG05 197 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 LRRC73Q5JTD7 316 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 LRRC31Q6UY01 552 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 FAM131BQ86XD5 332 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 XYLT1Q86Y38 959 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 PGAP3Q96FM1 320 aaPredicted RBP16.76■□□□□ 0.27
SSH1-208ENST00000548522 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 HEPHQ9BQS7 1158 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 USP29Q9HBJ7 922 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 NDFIP2Q9NV92 336 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 ENTPD2Q9Y5L3 495 aa16.76■□□□□ 0.27
SSH1-208ENST00000548522 COL6A6A6NMZ7 2263 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 ILVBLA1L0T0 632 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 H3BM21 787 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 J3QKU1 62 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 MUSKO15146 869 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 GCATO75600 419 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 DUSP3P51452 185 aaPredicted RBP16.75■□□□□ 0.27
SSH1-208ENST00000548522 UCNP55089 124 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 PFN3P60673 137 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 GNA12Q03113 381 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 C1orf61Q13536 156 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 SLC25A52Q3SY17 297 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 KIAA1614Q5VZ46 1190 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 LEKR1Q6ZMV7 388 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 BNIPLQ7Z465 357 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 PCDH20Q8N6Y1 951 aaKnown RBP16.75■□□□□ 0.27
SSH1-208ENST00000548522 C1orf74Q96LT6 269 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 C1QTNF2Q9BXJ5 285 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 CEP44Q9C0F1 390 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 RRN3Q9NYV6 651 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 HECAQ9UBI9 543 aaPredicted RBP16.75■□□□□ 0.27
SSH1-208ENST00000548522 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
SSH1-208ENST00000548522 TRPM6Q9BX84 2022 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 GOLGA8SH3BPF8 625 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 FPGTO14772 594 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 AP1G1O43747 822 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 CELA2BP08218 269 aaPredicted RBP16.74■□□□□ 0.27
SSH1-208ENST00000548522 SKOR1P84550 965 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 VAC14Q08AM6 782 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 TAF3Q5VWG9 929 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 RETSATQ6NUM9 610 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 DPY19L2P1Q6NXN4 242 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 DCP2Q8IU60 420 aaKnown RBP16.74■□□□□ 0.27
SSH1-208ENST00000548522 ZDHHC17Q8IUH5 632 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 SLC35F3Q8IY50 421 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 FAM71AQ8IYT1 594 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
SSH1-208ENST00000548522 FEM1CQ96JP0 617 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 SLC46A1Q96NT5 459 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 LRRC61Q9BV99 259 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 ZYG11BQ9C0D3 744 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 IPO11Q9UI26 975 aaKnown RBP16.74■□□□□ 0.27
SSH1-208ENST00000548522 SSUH2Q9Y2M2 353 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 CSNK1G3Q9Y6M4 447 aa16.74■□□□□ 0.27
SSH1-208ENST00000548522 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 EME2A4GXA9 379 aaPredicted RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 C16orf96A6NNT2 1141 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 FGFR1OPO95684 399 aaKnown RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 CDH5P33151 784 aaPredicted RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 IGFALSP35858 605 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 GABRB2P47870 512 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 NR0B2Q15466 257 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 TCEA2Q15560 299 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms