RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KDM5DQ9BY66 1539 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TRBV5-3A0A0A0MS03 114 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 KIR2DS5A0A0G2JLQ3 304 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TARSL2A2RTX5 802 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 PABPN1LA6NDY0 278 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 FOXO6A8MYZ6 492 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 KIR2DS3K7RE56 304 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 PPP6CO00743 305 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TP73O15350 636 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TGFB1I1O43294 461 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 STRNO43815 780 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CEP104O60308 925 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CNOT3O75175 753 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 NFATC1O95644 943 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CTSAP10619 480 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 UBL4AP11441 157 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 PSMA4P25789 261 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 RGS2P41220 211 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 SKIV2L2P42285 1042 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 BLKP51451 505 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CYP2J2P51589 502 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 GALNT3Q14435 633 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 SLC9B1Q4ZJI4 515 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 ASPHD1Q5U4P2 390 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CCDC30Q5VVM6 783 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TTLL5Q6EMB2 1281 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TMEM81Q6P7N7 255 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 C4orf50Q6ZRC1 276 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 PRSS45Q7RTY3 260 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 DIS3L2Q8IYB7 885 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 ZMIZ2Q8NF64 920 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 FAR1Q8WVX9 515 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 MPHOSPH8Q99549 860 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 FAM118BQ9BPY3 351 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CHCHD6Q9BRQ6 235 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 HIPK3Q9H422 1215 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 BRF2Q9HAW0 419 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 VEZTQ9HBM0 779 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 PAPOLBQ9NRJ5 636 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 TERF2IPQ9NYB0 399 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 MPP6Q9NZW5 540 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 AGO2Q9UKV8 859 aaKnown RBP4.38□□□□□ -1.71
PTCH1-216ENST00000548379 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 CAMK2AQ9UQM7 478 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
PTCH1-216ENST00000548379 MED14O60244 1454 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CCDC141Q6ZP82 1450 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 MBD5Q9P267 1494 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 MYO3AQ8NEV4 1616 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 A0A0G2JK05 382 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CBY3A6NI87 242 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CHMP24386 653 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 ABCD1P33897 745 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 EFNA5P52803 228 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 STIM1Q13586 685 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 KRT32Q14532 448 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SLC9C1Q4G0N8 1177 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 MIDNQ504T8 468 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SNX30Q5VWJ9 437 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 TMEM268Q5VZI3 342 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CYB5R4Q7L1T6 521 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 KDELC2Q7Z4H8 507 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 WDR5BQ86VZ2 330 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 DDIASQ8IXT1 998 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 C11orf65Q8NCR3 313 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 OR4N2Q8NGD1 307 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CREB3L4Q8TEY5 395 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SIGLEC11Q96RL6 698 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SH2D3AQ9BRG2 576 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 IFT27Q9BW83 186 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 MRIQ9BWK5 157 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CXorf56Q9H5V9 222 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 ACTR5Q9H9F9 607 aaPredicted RBP4.37□□□□□ -1.71
PTCH1-216ENST00000548379 KLHL13Q9P2N7 655 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 PEMTQ9UBM1 199 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SWAP70Q9UH65 585 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 SLC8A2Q9UPR5 921 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 MROH2AA6NES4 1674 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 ADGRF5Q8IZF2 1346 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 KANK1Q14678 1352 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 CEP162Q5TB80 1403 aa4.37□□□□□ -1.71
PTCH1-216ENST00000548379 PLXNC1O60486 1568 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SMIM35A0A1B0GVV1 85 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 PI4KAP2A4QPH2 592 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 PRSS47A8MTI9 375 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 F8W810 466 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 MASP2O00187 686 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 TLX3O43711 291 aaPredicted RBP4.36□□□□□ -1.71
PTCH1-216ENST00000548379 SCGB1D1O95968 90 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 POLD2P49005 469 aa4.36□□□□□ -1.71
PTCH1-216ENST00000548379 CENPAP49450 140 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms