RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 LMAN2Q12907 356 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ADAM15Q13444 863 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 FRG1Q14331 258 aaKnown RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PLEKHG6Q3KR16 790 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 LEKR1Q6ZMV7 388 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 UNC5AQ6ZN44 842 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PRPF39Q86UA1 669 aaKnown RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ARRDC2Q8TBH0 407 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 BPIFB1Q8TDL5 484 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 OSCP1Q8WVF1 389 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 CDKL2Q92772 493 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 FGF13Q92913 245 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ALG14Q96F25 216 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 IFT43Q96FT9 208 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 MRGPRX2Q96LB1 330 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 NUDCD1Q96RS6 583 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 MRM3Q9HC36 420 aaKnown RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 PLK2Q9NYY3 685 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 CDH7Q9ULB5 785 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 SOX13Q9UN79 622 aa12.54□□□□□ -0.4
RAB5B-204ENST00000548068 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
RAB5B-204ENST00000548068 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 INSIG1O15503 277 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 SNAP91O60641 907 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 USP1O94782 785 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 FGF1P05230 155 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 MMP2P08253 660 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 INHBAP08476 426 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 TYRP14679 529 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 GLDCP23378 1020 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 MTHFRP42898 656 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
RAB5B-204ENST00000548068 RHOAP61586 193 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 AP1S1P61966 158 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 CRYMQ14894 314 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 CYTH1Q15438 398 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PCSK7Q16549 785 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 SYCE2Q6PIF2 218 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 RANBP10Q6VN20 620 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 TTC17Q96AE7 1141 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 ZBTB9Q96C00 473 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 APOL2Q9BQE5 337 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 PRO3102Q9H379 93 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 NOVA2Q9UNW9 492 aaKnown RBP12.53□□□□□ -0.4
RAB5B-204ENST00000548068 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
RAB5B-204ENST00000548068 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 FAM159BA6NKW6 160 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 LINC01565O15544 149 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ALDH1A2O94788 518 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ADH5P11766 374 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
RAB5B-204ENST00000548068 PAMP19021 973 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 CR2P20023 1033 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 NR1D1P20393 614 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 CD70P32970 193 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 CSNK1DP48730 415 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 CDK18Q07002 472 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 TMED2Q15363 201 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 SLC1A5Q15758 541 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 KBTBD12Q3ZCT8 623 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 LGSNQ5TDP6 509 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 LRRC6Q86X45 466 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 APCDD1Q8J025 514 aa12.52□□□□□ -0.41
RAB5B-204ENST00000548068 AHI1Q8N157 1196 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms