RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 FAF2Q96CS3 445 aa23.65■■□□□ 1.38
CTDSP2-203ENST00000547701 GDAP1L1Q96MZ0 367 aa23.65■■□□□ 1.38
CTDSP2-203ENST00000547701 ZNF599Q96NL3 588 aa23.65■■□□□ 1.38
CTDSP2-203ENST00000547701 TM9SF3Q9HD45 589 aa23.65■■□□□ 1.38
CTDSP2-203ENST00000547701 UBA2Q9UBT2 640 aaPredicted RBP23.65■■□□□ 1.38
CTDSP2-203ENST00000547701 PLXNA2O75051 1894 aa23.64■■□□□ 1.38
CTDSP2-203ENST00000547701 C4orf47A7E2U8 309 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 KPNA3O00505 521 aaPredicted RBP23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 RNGTTO60942 597 aaKnown RBP23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 FSBPO95073 299 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 CDC25BP30305 580 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 PAPOLAP51003 745 aaKnown RBP23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 RAD51Q06609 339 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 CYTH1Q15438 398 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 LRRC38Q5VT99 294 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 HSPH1Q92598 858 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 ZNF670Q9BS34 389 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 EBF2Q9HAK2 575 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 DYRK4Q9NR20 520 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 DKK3Q9UBP4 350 aa23.64■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3DA0A087WVF3 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3IA0A087WXS9 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3EA0A087X179 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3KA0A087X1G2 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3FA6NER0 549 aaPredicted RBP23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3LB9A6J9 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 RNF103O00237 685 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 BNIP3LO60238 219 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3HP0C7X1 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 SERPINB6P35237 376 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 SLC1A1P43005 524 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 NEK3P51956 506 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TEAD4Q15561 434 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 ZNF805Q5CZA5 627 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3GQ6DHY5 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3CQ6IPX1 549 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TMCO3Q6UWJ1 677 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 DGLUCYQ7Z3D6 616 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TMTC1Q8IUR5 882 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 MAP7D3Q8IWC1 876 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TBC1D3Q8IZP1 549 aaPredicted RBP23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 TM6SF2Q9BZW4 377 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 LHX3Q9UBR4 397 aa23.63■■□□□ 1.37
CTDSP2-203ENST00000547701 A0A0A6YYK5 440 aaPredicted RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 J3KR12 359 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 VILLO15195 856 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 IGSF6O95976 241 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 CSRP1P21291 193 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 AMPD1P23109 780 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 SUOXP51687 545 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 CDH6P55285 790 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 BNC1Q01954 994 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 OVGP1Q12889 678 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 GRIK2Q13002 908 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 DPYSL3Q14195 570 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 DBX2Q6ZNG2 339 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 PRPF39Q86UA1 669 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 IQCHQ86VS3 1027 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 SPOCK2Q92563 424 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 FATE1Q969F0 183 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 CELF6Q96J87 481 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 CALR3Q96L12 384 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 MIR1-1HGQ9H1L0 117 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 IMPACTQ9P2X3 320 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 IPO11Q9UI26 975 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 SLCO1B1Q9Y6L6 691 aa23.62■■□□□ 1.37
CTDSP2-203ENST00000547701 ADRB3P13945 408 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 CYLC1P35663 651 aaPredicted RBP23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 DNA2P51530 1060 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 TAS2R40P59535 323 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 PAFAH1B3Q15102 231 aaKnown RBP23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 ZNF354CQ86Y25 554 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 MINDY1Q8N5J2 469 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 GRIN3AQ8TCU5 1115 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 ASB12Q8WXK4 309 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 PSKH2Q96QS6 385 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 TUBGCP5Q96RT8 1024 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 LUC7LQ9NQ29 371 aaKnown RBP23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 ETNK2Q9NVF9 386 aa23.61■■□□□ 1.37
CTDSP2-203ENST00000547701 A0A1W2PR77 199 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 TSPAN11A1L157 253 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 FAM47DPA6NHR8 397 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 PLK4O00444 970 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 DFNA5O60443 496 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 PEX11BO96011 259 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 MAGEA1P43355 309 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 ATXN3P54252 364 aaPredicted RBP23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 RHOAP61586 193 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 PPP2CBP62714 309 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 PPP2CAP67775 309 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 TMEM259Q4ZIN3 620 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 SETMARQ53H47 684 aaPredicted RBP23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 NAPEPLDQ6IQ20 393 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 FAM174AQ8TBP5 190 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 SKA1Q96BD8 255 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 ZNF641Q96N77 438 aaPredicted RBP23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 ZDHHC6Q9H6R6 413 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 PCDHGB2Q9Y5G2 931 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 FADS3Q9Y5Q0 445 aa23.6■■□□□ 1.37
CTDSP2-203ENST00000547701 EPN1Q9Y6I3 576 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms