RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 ESAMQ96AP7 390 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 BTRCQ9Y297 605 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 DPYSL4O14531 572 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
BRF1-210ENST00000547374 DPP6P42658 865 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 RPL5P46777 297 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 SLC7A2P52569 658 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 ZNF789Q5FWF6 425 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 HBEGFQ99075 208 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 OXSMQ9NWU1 459 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 NCKIPSDQ9NZQ3 722 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 HACD1B0YJ81 288 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 MAGEB3O15480 346 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 TREHO43280 583 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 CD68P34810 354 aaPredicted RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 MAGEA3P43357 314 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 MYLK3Q32MK0 819 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 TIFABQ6ZNK6 161 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 CHST15Q7LFX5 561 aaPredicted RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 CNDP1Q96KN2 507 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 NT5MQ9NPB1 228 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 ZCWPW2A0A1B0GU75 182 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 H3BNX3 289 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 MRASO14807 208 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 MPOP05164 745 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 HARS2P49590 506 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 ZFP28Q8NHY6 868 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 APBB2Q92870 758 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 SOX17Q9H6I2 414 aaPredicted RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 UTP6Q9NYH9 597 aaKnown RBP13.14□□□□□ -0.31
BRF1-210ENST00000547374 TTC3P53804 2025 aa13.14□□□□□ -0.31
BRF1-210ENST00000547374 MATN2O00339 956 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 MLNP12872 115 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 CHRM3P20309 590 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 ERO1BQ86YB8 467 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 BLOC1S5Q8TDH9 187 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 SNX27Q96L92 541 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 PAAF1Q9BRP4 392 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 PSMD12O00232 456 aaPredicted RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 TADA2AO75478 443 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 CD4P01730 458 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 LPCAT2Q7L5N7 544 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 OFCC1Q8IZS5 231 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 DGCR14Q96DF8 476 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 PCED1BQ96HM7 432 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 MID2Q9UJV3 735 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 ZNF195O14628 629 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 GFAPP14136 432 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 KCNA5P22460 613 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 LRPAP1P30533 357 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 SLC1A2P43004 574 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 ADGRE1Q14246 886 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 SV2CQ496J9 727 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 PGM2L1Q6PCE3 622 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 ZC3HC1Q86WB0 502 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 CLVS1Q8IUQ0 354 aaPredicted RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 TXNDC5Q8NBS9 432 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
BRF1-210ENST00000547374 DNAJB14Q8TBM8 379 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
BRF1-210ENST00000547374 SHROOM3Q8TF72 1996 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 LRRC14BA6NHZ5 514 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 SCAMP3O14828 347 aaKnown RBP13.12□□□□□ -0.31
BRF1-210ENST00000547374 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
BRF1-210ENST00000547374 TNFAIP8O95379 198 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 SMPD1P17405 629 aa13.12□□□□□ -0.31
BRF1-210ENST00000547374 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms