RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TUBA1BP68363 451 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 ILF3Q12906 894 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 CTTNQ14247 550 aaKnown RBP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 PALB2Q86YC2 1186 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 OR4N2Q8NGD1 307 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 GPT2Q8TD30 523 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 CSGALNACT1Q8TDX6 532 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 KTI12Q96EK9 354 aaPredicted RBP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 NODALQ96S42 347 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 MSTO1Q9BUK6 570 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 NPFFR1Q9GZQ6 430 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 TAF1DQ9H5J8 278 aaPredicted RBP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 CXorf56Q9H5V9 222 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 HDAC6Q9UBN7 1215 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 GRHPRQ9UBQ7 328 aa4.37□□□□□ -1.71
CCDC38-204ENST00000546816 AGO1Q9UL18 857 aaKnown RBP4.37□□□□□ -1.71
CCDC38-204ENST00000546816 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 IPO5O00410 1097 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 ITM2AO43736 263 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 PLIN1O60240 522 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 KRT38O76015 456 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 TFRCP02786 760 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 MMP3P08254 477 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 GJC1P36383 396 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 SKIV2L2P42285 1042 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 THOC5Q13769 683 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 BYSLQ13895 437 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 RBM39Q14498 530 aaKnown RBP4.36□□□□□ -1.71
CCDC38-204ENST00000546816 HLFQ16534 295 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 TMC8Q8IU68 726 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 TCP11L2Q8N4U5 519 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 PLCB1Q9NQ66 1216 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 SLC45A1Q9Y2W3 748 aa4.36□□□□□ -1.71
CCDC38-204ENST00000546816 LINC01553A4QN01 128 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 OR6C68A6NDL8 312 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 PRR23AA6NEV1 266 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 FAM157AC9JC47 383 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 CBX6O95503 412 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 METTL18O95568 372 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 F7P08709 466 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-204ENST00000546816 CKMT1AP12532 417 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 PTPN9P43378 593 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 MXI1P50539 228 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 RBM5P52756 815 aaKnown RBP eCLIP4.35□□□□□ -1.71
CCDC38-204ENST00000546816 ARHGAP8P85298 464 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 ADORA2A-AS1P86434 159 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 BLMHQ13867 455 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 RPE65Q16518 533 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 AP5B1Q2VPB7 878 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 CCDC38Q502W7 563 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 RUNDC3AQ59EK9 446 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 ZNF484Q5JVG2 852 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 JMJD6Q6NYC1 403 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-204ENST00000546816 C1orf228Q6PIY5 440 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 SETD9Q8NE22 299 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 POF1BQ8WVV4 589 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 ATOH1Q92858 354 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-204ENST00000546816 WBP2Q969T9 261 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 MVB12BQ9H7P6 319 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 CLK4Q9HAZ1 481 aaKnown RBP4.35□□□□□ -1.71
CCDC38-204ENST00000546816 FBXO40Q9UH90 709 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 DHDHQ9UQ10 334 aa4.35□□□□□ -1.71
CCDC38-204ENST00000546816 F5H423 210 aaPredicted RBP4.34□□□□□ -1.71
CCDC38-204ENST00000546816 BMPR1BO00238 502 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 SEPT4O43236 478 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 BUB3O43684 328 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 STRNO43815 780 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 VEGFAP15692 232 aaPredicted RBP4.34□□□□□ -1.71
CCDC38-204ENST00000546816 YWHAQP27348 245 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 DCTDP32321 178 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 CUL4BQ13620 913 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 SH2D4BQ5SQS7 431 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 ZNF449Q6P9G9 518 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 PATL1Q86TB9 770 aaKnown RBP4.34□□□□□ -1.71
CCDC38-204ENST00000546816 CCDC146Q8IYE0 955 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 IGSF21Q96ID5 467 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 TWSG1Q9GZX9 223 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 GAREM1Q9H706 876 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 WDR6Q9NNW5 1121 aaKnown RBP4.34□□□□□ -1.71
CCDC38-204ENST00000546816 TCF7L2Q9NQB0 619 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 ATP8A2Q9NTI2 1148 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 DAAM1Q9Y4D1 1078 aa4.34□□□□□ -1.71
CCDC38-204ENST00000546816 A0A096LPK6 155 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 A0A1B0GVM2 712 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 KDM4EB2RXH2 506 aaPredicted RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 CHL1O00533 1208 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 KIF1CO43896 1103 aaKnown RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 SERPINI2O75830 405 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 FAM155BO75949 473 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 C21orf33P30042 268 aaPredicted RBP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 GPR12P47775 334 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 SLC39A14Q15043 492 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCDC38-204ENST00000546816 TIGD6Q17RP2 521 aa4.33□□□□□ -1.72
CCDC38-204ENST00000546816 TUBB8Q3ZCM7 444 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms