RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 USP28Q96RU2 1077 aa11□□□□□ -0.65
TMEM116-203ENST00000546537 MAGEF1Q9HAY2 307 aa11□□□□□ -0.65
TMEM116-203ENST00000546537 RAB20Q9NX57 234 aa11□□□□□ -0.65
TMEM116-203ENST00000546537 VPS28Q9UK41 221 aa11□□□□□ -0.65
TMEM116-203ENST00000546537 VPS4AQ9UN37 437 aa11□□□□□ -0.65
TMEM116-203ENST00000546537 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
TMEM116-203ENST00000546537 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 NKX2-8O15522 239 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 SMAD6O43541 496 aaKnown RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 FBXO21O94952 628 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 PRKCGP05129 697 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 ALPIP09923 528 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 CCL4P13236 92 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 PNLIPP16233 465 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 L1CAMP32004 1257 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 UGT1A3P35503 534 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 BLKP51451 505 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 MCCD1P59942 119 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 CENPCQ03188 943 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 EIF4EBP2Q13542 120 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 PHF19Q5T6S3 580 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 SYPL2Q5VXT5 272 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 LCLAT1Q6UWP7 414 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 BEND5Q7L4P6 421 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 ATP6V0D2Q8N8Y2 350 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 Q8N9G6 341 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 GALNT11Q8NCW6 608 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 FBXL13Q8NEE6 735 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 GPR156Q8NFN8 814 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 APOBEC4Q8WW27 367 aaKnown RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 SLC45A3Q96JT2 553 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 HSFY1Q96LI6 401 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 TAAR9Q96RI9 348 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 EDEM3Q9BZQ6 932 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 MIS12Q9H081 205 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 SEMA6CQ9H3T2 930 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 ZNF768Q9H5H4 540 aaKnown RBP10.99□□□□□ -0.65
TMEM116-203ENST00000546537 KIAA1257Q9ULG3 409 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 GPR34Q9UPC5 381 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 TRAF3IP3Q9Y228 551 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 TP53TG5Q9Y2B4 290 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 PCDHGA3Q9Y5H0 932 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 WASF2Q9Y6W5 498 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
TMEM116-203ENST00000546537 TOR1BO14657 336 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 TSPAN6O43657 245 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 KLRC4O43908 158 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CNTN5O94779 1100 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 IGLV3-25P01717 112 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 KRT13P13646 458 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 GLB1P16278 677 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 RRM1P23921 792 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 GTF2H1P32780 548 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 IGFALSP35858 605 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 EIF4A3P38919 411 aaKnown RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CLCN6P51797 869 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 HK3P52790 923 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 KRT83P78385 493 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CDC20Q12834 499 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 EFHC2Q5JST6 749 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 DPY19L3Q6ZPD9 716 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 PARS2Q7L3T8 475 aaKnown RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 MAMDC2Q7Z304 686 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 SPRED1Q7Z699 444 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 HEATR4Q86WZ0 1026 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 GKN2Q86XP6 184 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 CACNA2D3Q8IZS8 1091 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 TEX19Q8NA77 164 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 PMEPA1Q969W9 287 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 FAM149B1Q96BN6 582 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 RPRD1AQ96P16 312 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 PSMB7Q99436 277 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 AKAP7Q9P0M2 348 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 SLC12A6Q9UHW9 1150 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
TMEM116-203ENST00000546537 ZNF106Q9H2Y7 1883 aaKnown RBP10.98□□□□□ -0.65
TMEM116-203ENST00000546537 DUX1O43812 170 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 SNAP91O60641 907 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 DDAH2O95865 285 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 TRUB2O95900 331 aaKnown RBP10.97□□□□□ -0.65
TMEM116-203ENST00000546537 FGF3P11487 239 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-203ENST00000546537 CTSEP14091 401 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 NR2F2P24468 414 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 NASPP49321 788 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-203ENST00000546537 MXI1P50539 228 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 IRAK1P51617 712 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 CUL2Q13617 745 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 SEPT6Q14141 434 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 RABEP1Q15276 862 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 NFIL3Q16649 462 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 CERCAMQ5T4B2 595 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 C22orf39Q6P5X5 142 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
TMEM116-203ENST00000546537 ZSWIM1Q9BR11 485 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms