RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 HSD3B7Q9H2F3 369 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 TMEM63CQ9P1W3 806 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 FZD10Q9ULW2 581 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 CABIN1Q9Y6J0 2220 aa9.52□□□□□ -0.89
YBX3-218ENST00000546298 WDR87Q6ZQQ6 2873 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 A0A1W2PQC6 194 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 NEMP2A6NFY4 417 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 RASA4BC9J798 803 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 TEX33O43247 280 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 RASA4O43374 803 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 RNF8O76064 485 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 IGSF6O95976 241 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 PAK4O96013 591 aaPredicted RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 ALPPL2P10696 532 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 GZMAP12544 262 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 JUPP14923 745 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 PSMA2P25787 234 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 SUOXP51687 545 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 TPI1P60174 286 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 RHOAP61586 193 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 RPL7AP62424 266 aaKnown RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 E2F1Q01094 437 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 MAMLD1Q13495 774 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 GRM3Q14832 879 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 ASIC2Q16515 512 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 SEL1L3Q68CR1 1132 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 GDPD4Q6W3E5 623 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 Q6ZSR6 202 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 PARS2Q7L3T8 475 aaKnown RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 TMC6Q7Z403 805 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 ABI3BPQ7Z7G0 1075 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 UMODL1-AS1Q8N2C9 162 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 PYROXD2Q8N2H3 581 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 ASB12Q8WXK4 309 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 BAP1Q92560 729 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 TSC1Q92574 1164 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 TRIM11Q96F44 468 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 MAGEB5Q9BZ81 275 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 DKK4Q9UBT3 224 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 IPO11Q9UI26 975 aaKnown RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 ZFR2Q9UPR6 939 aaKnown RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 CA5BQ9Y2D0 317 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 ACTL7AQ9Y615 435 aa9.51□□□□□ -0.89
YBX3-218ENST00000546298 MAP1BP46821 2468 aaKnown RBP9.51□□□□□ -0.89
YBX3-218ENST00000546298 TRABD2BA6NFA1 517 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 ARHGAP42A6NI28 874 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 LRRC53A6NM62 1247 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 TMCO5BA8MYB1 307 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 H3BM21 787 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 FPGTO14772 594 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 DAPK3O43293 454 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 SDC3O75056 442 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 TMCC1O94876 653 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 SERPINC1P01008 464 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 UGT2B4P06133 528 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 XPAP23025 273 aaPredicted RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 RABIFP47224 123 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 ACADVLP49748 655 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 ZNF135P52742 658 aaPredicted RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 NDST2P52849 883 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 CLDN2P57739 230 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 HNRNPKP61978 463 aaKnown RBP eCLIP9.5□□□□□ -0.89
YBX3-218ENST00000546298 DAB2P98082 770 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 KLHL30Q0D2K2 578 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 DNAJC3Q13217 504 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 SERINC3Q13530 473 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 PLEKHA7Q6IQ23 1121 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 KYAT3Q6YP21 454 aaKnown RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 GCNT7Q6ZNI0 430 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 KANSL1Q7Z3B3 1105 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 TTC7BQ86TV6 843 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 PSTKQ8IV42 348 aaKnown RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 DENND6BQ8NEG7 585 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 OR4C6Q8NH72 309 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 HCAR2Q8TDS4 363 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 FNIP1Q8TF40 1166 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 HMCESQ96FZ2 354 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 KLHL32Q96NJ5 620 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 LENG8Q96PV6 779 aaPredicted RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 SYT11Q9BT88 431 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 C1QTNF7Q9BXJ2 289 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 TTYH3Q9C0H2 523 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 FZD3Q9NPG1 666 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 UBA2Q9UBT2 640 aaPredicted RBP9.5□□□□□ -0.89
YBX3-218ENST00000546298 NEU3Q9UQ49 428 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 MFHAS1Q9Y4C4 1052 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 SCINQ9Y6U3 715 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms