RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 LEFTY1O75610 366 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 IGLV3-19P01714 112 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 CA4P22748 312 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 SERPINA4P29622 427 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 TNNT3P45378 269 aaPredicted RBP17.75■□□□□ 0.43
CD9-211ENST00000546073 MMP13P45452 471 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 NEK3P51956 506 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 POLR2LP62875 67 aaKnown RBP17.75■□□□□ 0.43
CD9-211ENST00000546073 CCZ1BP86790 482 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 CCZ1P86791 482 aaPredicted RBP17.75■□□□□ 0.43
CD9-211ENST00000546073 ZNF33AQ06730 810 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 BCL2L1Q07817 233 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 GALNT2Q10471 571 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 AP1B1Q10567 949 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 HNRNPDQ14103 355 aaKnown RBP17.75■□□□□ 0.43
CD9-211ENST00000546073 SEL1L2Q5TEA6 688 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 PMS2CLQ68D20 193 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 MFSD7Q6UXD7 560 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 GDPD4Q6W3E5 623 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 CCDC13Q8IYE1 715 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 NDUFAF2Q8N183 169 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 OR2T34Q8NGX1 318 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 SKA1Q96BD8 255 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 KLC2Q9H0B6 622 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 NEUROG2Q9H2A3 272 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 SCUBE2Q9NQ36 999 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 TRIM10Q9UDY6 481 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 AMACRQ9UHK6 382 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 SALL4Q9UJQ4 1053 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
CD9-211ENST00000546073 A0A1W2PQ67 120 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 MATN3O15232 486 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 MTSS1O43312 755 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 MFSD11O43934 449 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 LRP3O75074 770 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 FSBPO95073 299 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 FTCDO95954 541 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 CDKN2BP42772 138 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 CSNK1DP48730 415 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 SCNN1BP51168 640 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 AP1S1P61966 158 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 CYTH1Q15438 398 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 PPP2R5EQ16537 467 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 POM121L1PQ3SYA9 428 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 ZNF805Q5CZA5 627 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 RALGPS1Q5JS13 557 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 SLC9A4Q6AI14 798 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 ERN2Q76MJ5 926 aaKnown RBP17.74■□□□□ 0.43
CD9-211ENST00000546073 ARMCX6Q7L4S7 300 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 SRLQ86TD4 932 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 NT5DC3Q86UY8 548 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 C12orf50Q8NA57 414 aaPredicted RBP17.74■□□□□ 0.43
CD9-211ENST00000546073 CEP76Q8TAP6 659 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 PIGKQ92643 395 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 RAB7BQ96AH8 199 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 HSPA12BQ96MM6 686 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 ZNF641Q96N77 438 aaPredicted RBP17.74■□□□□ 0.43
CD9-211ENST00000546073 CPEB1Q9BZB8 566 aaKnown RBP17.74■□□□□ 0.43
CD9-211ENST00000546073 PDFQ9HBH1 243 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 EVLQ9UI08 416 aaPredicted RBP17.74■□□□□ 0.43
CD9-211ENST00000546073 EFR3BQ9Y2G0 817 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 MFHAS1Q9Y4C4 1052 aa17.74■□□□□ 0.43
CD9-211ENST00000546073 PRR23AA6NEV1 266 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 PRR5-ARHGAP8B1AHC4 643 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 MAFKO60675 156 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
CD9-211ENST00000546073 BCKDHBP21953 392 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 ITGB7P26010 798 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 NUDT1P36639 197 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 SUOXP51687 545 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 ATXN7L2Q5T6C5 722 aaPredicted RBP17.73■□□□□ 0.43
CD9-211ENST00000546073 TTC7BQ86TV6 843 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 PRPF39Q86UA1 669 aaKnown RBP17.73■□□□□ 0.43
CD9-211ENST00000546073 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 DEFB119Q8N690 84 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 PQLC3Q8N755 202 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 PLD5Q8N7P1 536 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 LRRC57Q8N9N7 239 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 SUMF1Q8NBK3 374 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 TTC13Q8NBP0 860 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 NETO2Q8NC67 525 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 CHST14Q8NCH0 376 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 OR6K2Q8NGY2 324 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 HCAR2Q8TDS4 363 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 TFB1MQ8WVM0 346 aaKnown RBP17.73■□□□□ 0.43
CD9-211ENST00000546073 HDAC11Q96DB2 347 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 TSGA13Q96PP4 275 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 PSKH2Q96QS6 385 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 HDAC8Q9BY41 377 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 OSBPL8Q9BZF1 889 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 POLR1EQ9GZS1 481 aaKnown RBP17.73■□□□□ 0.43
CD9-211ENST00000546073 MIR1-1HGQ9H1L0 117 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 ARRDC1-AS1Q9H2J1 176 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 RBM22Q9NW64 420 aaKnown RBP eCLIP17.73■□□□□ 0.43
CD9-211ENST00000546073 DTLQ9NZJ0 730 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 SEPT10Q9P0V9 454 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 MBD1Q9UIS9 605 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms