RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 RNF34Q969K3 372 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 TSACCQ96A04 125 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 TBATAQ96M53 351 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 TAAR9Q96RI9 348 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 TNKS2Q9H2K2 1166 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 CNGB3Q9NQW8 809 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 APPL1Q9UKG1 709 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 TLR6Q9Y2C9 796 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 OR51B4Q9Y5P0 310 aa15.69■□□□□ 0.1
CLSTN3-216ENST00000545663 LOC101059948A0A1B0GTJ6 334 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 ENDOD1O94919 500 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 LTFP02788 710 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 ADRB3P13945 408 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 RECQLP46063 649 aaPredicted RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 BST2Q10589 180 aaKnown RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 SEPT6Q14141 434 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 ZC3H12AQ5D1E8 599 aaKnown RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 C16orf46Q6P387 395 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 HID1Q8IV36 788 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 PRR7Q8TB68 274 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 TMC2Q8TDI7 906 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 KCTD13Q8WZ19 329 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 IMPG2Q9BZV3 1241 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 DNAI2Q9GZS0 605 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 GPN2Q9H9Y4 310 aaPredicted RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 CGNQ9P2M7 1197 aaKnown RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 ERRFI1Q9UJM3 462 aaPredicted RBP15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 PCDHGA3Q9Y5H0 932 aa15.68■□□□□ 0.1
CLSTN3-216ENST00000545663 IKBKBO14920 756 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 SNAP91O60641 907 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 LEFTY1O75610 366 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 LDLRP01130 860 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 PRNPP04156 253 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 TRIM49P0CI25 452 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 TRIM49CP0CI26 452 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 RRM1P23921 792 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 IGFALSP35858 605 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 EIF4A3P38919 411 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 NEK3P51956 506 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 CENPCQ03188 943 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 CEBPZQ03701 1054 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 ELOCQ15369 112 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 KCTD16Q68DU8 428 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 TCTN3Q6NUS6 607 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 LVRNQ6Q4G3 990 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 RD3Q7Z3Z2 195 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 FSTL5Q8N475 847 aaPredicted RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 ATP11CQ8NB49 1132 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 GPR156Q8NFN8 814 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 SEMA4DQ92854 862 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 ART4Q93070 314 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 CENPTQ96BT3 561 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 MOCOSQ96EN8 888 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 SRRTQ9BXP5 876 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 MBNL1Q9NR56 388 aaKnown RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 IL36AQ9UHA7 158 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 VPS28Q9UK41 221 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 ITM2BQ9Y287 266 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 KCNMB2Q9Y691 235 aa15.67■□□□□ 0.1
CLSTN3-216ENST00000545663 SHANK1Q9Y566 2161 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 TCP11X1B4DZS4 312 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 M0QYT0 321 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 B4GAT1O43505 415 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 AMZ1Q400G9 498 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 MAP9Q49MG5 647 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 PMF1Q6P1K2 205 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 LINGO4Q6UY18 593 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 DPY19L3Q6ZPD9 716 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 TAC4Q86UU9 113 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 SCML4Q8N228 414 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 PRMT1Q99873 361 aaKnown RBP15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 NUDT22Q9BRQ3 303 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 EDEM3Q9BZQ6 932 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 TNMDQ9H2S6 317 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 AKAP7Q9P0M2 348 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 LRIT1Q9P2V4 623 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 DKK3Q9UBP4 350 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 MAP4K5Q9Y4K4 846 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 WASF2Q9Y6W5 498 aa15.66■□□□□ 0.1
CLSTN3-216ENST00000545663 F5H5T6 163 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 CAPN5O15484 640 aaPredicted RBP15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 ALPIP09923 528 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 CTSEP14091 401 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 GLB1P16278 677 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 HK3P52790 923 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 B4GALNT1Q00973 533 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 ALG11Q2TAA5 492 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 PRR30Q53SZ7 412 aaPredicted RBP15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 CERCAMQ5T4B2 595 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 SYPL2Q5VXT5 272 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 MACC1Q6ZN28 852 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 CCDC13Q8IYE1 715 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 OR6C4Q8NGE1 309 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 IRGQQ8WZA9 623 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 SERPINB11Q96P15 392 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms