RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 A8MV72 311 aaPredicted RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 SNPHO15079 494 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ULK1O75385 1050 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 AMPD1P23109 780 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 PTPN7P35236 360 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 RHAGQ02094 409 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 TFDP3Q5H9I0 405 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 FAM160B1Q5W0V3 765 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 IQSEC1Q6DN90 963 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ANGPTL8Q6UXH0 198 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 CAMKK1Q8N5S9 505 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 FITM2Q8N6M3 262 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ACAP3Q96P50 834 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 UPF3AQ9H1J1 476 aaKnown RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 FANCFQ9NPI8 374 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 DLGAP2Q9P1A6 1054 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 KLHL14Q9P2G3 628 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 GRXCR2A6NFK2 248 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 CCDC188H7C350 402 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 SCAMP2O15127 329 aaKnown RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 MSI1O43347 362 aaKnown RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 USP12O75317 370 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 DGKIO75912 1065 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 OCM2P0CE71 109 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 OCMP0CE72 109 aaPredicted RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 PRKACBP22694 351 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 CHRNA3P32297 505 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 IL12RB1P42701 662 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 TIAL1Q01085 375 aaKnown RBP eCLIP4.83□□□□□ -1.646e-6■■■■□ 21
SMAD5-212ENST00000545620 MTMR3Q13615 1198 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 DPYSQ14117 519 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 SLFN12LQ6IEE8 588 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ZNF425Q6IV72 752 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 KLHL35Q6PF15 583 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 BBS12Q6ZW61 710 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 RELL1Q8IUW5 271 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 SAMD14Q8IZD0 417 aaPredicted RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 OR8K3Q8NH51 312 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 HEXIM2Q96MH2 286 aaKnown RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ANKRD27Q96NW4 1050 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ARPC5LQ9BPX5 153 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 NUDT16L1Q9BRJ7 211 aaKnown RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ZNF304Q9HCX3 659 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 PRMT7Q9NVM4 692 aaPredicted RBP4.83□□□□□ -1.64
SMAD5-212ENST00000545620 BLOC1S6Q9UL45 172 aa4.83□□□□□ -1.64
SMAD5-212ENST00000545620 ASB14A6NK59 587 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 APOL3O95236 402 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 RAB4AP20338 218 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 SLC8A3P57103 927 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 YWHAZP63104 245 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 TDGQ13569 410 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 RGMBQ6NW40 437 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 RASSF6Q6ZTQ3 369 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ZNF677Q86XU0 584 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CCDC105Q8IYK2 499 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 EIF1ADQ8N9N8 165 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 UBASH3BQ8TF42 649 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 IPCEF1Q8WWN9 437 aaPredicted RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 EDEM1Q92611 657 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PPWD1Q96BP3 646 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 DGCR6LQ9BY27 220 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 TMEM245Q9H330 911 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 RPF1Q9H9Y2 349 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PCDH12Q9NPG4 1184 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 MAFFQ9ULX9 164 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 VILLO15195 856 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ZW10O43264 779 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PSTPIP1O43586 416 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 SMNDC1O75940 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ASMTLO95671 621 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 AGR2O95994 175 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 RARBP10826 455 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 GHRP10912 638 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PAMP19021 973 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 GARSP41250 739 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 SLC26A2P50443 739 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 BCAR1P56945 870 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ADIGQ0VDE8 80 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 TAF1CQ15572 869 aaPredicted RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 TIGD6Q17RP2 521 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 DRICH1Q6PGQ1 229 aaPredicted RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ZNF554Q86TJ5 538 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 ADGRF2Q8IZF7 708 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 C4orf33Q8N1A6 199 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CNBD2Q96M20 576 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CATSPER2Q96P56 530 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CSPG4P5Q96PW8 444 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 NPY6RQ99463 290 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 DRG1Q9Y295 367 aaKnown RBP4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PIKFYVEQ9Y2I7 2098 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CRCPO75575 148 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 TAC1P20366 129 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 CASP2P42575 452 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 PGDP52209 483 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 VBP1P61758 197 aa4.82□□□□□ -1.64
SMAD5-212ENST00000545620 KRR1Q13601 381 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms