RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ATP11AP98196 1134 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 INSM1Q01101 510 aaPredicted RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 SEMG2Q02383 582 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 GNA12Q03113 381 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 ILKQ13418 452 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ZNF542PQ5EBM4 170 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 CARD16Q5EG05 197 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 TCP11X2Q5H9J9 407 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ACBD5Q5T8D3 534 aaPredicted RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 RETSATQ6NUM9 610 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ZNF783Q6ZMS7 281 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 GCNT7Q6ZNI0 430 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ARCQ7LC44 396 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ABI3BPQ7Z7G0 1075 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 DRC7Q8IY82 874 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 SLC22A18ASQ8N1D0 253 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 SLC20A1Q8WUM9 679 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 RXFP2Q8WXD0 754 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 BAP1Q92560 729 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 HEPHQ9BQS7 1158 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 CALN1Q9BXU9 219 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ZYG11BQ9C0D3 744 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 GANQ9H2C0 597 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ATP13A1Q9HD20 1204 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 METTL5Q9NRN9 209 aaKnown RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 TAB2Q9NYJ8 693 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 PPARGC1AQ9UBK2 798 aaKnown RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
USP28-215ENST00000545608 FADS3Q9Y5Q0 445 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 AK5Q9Y6K8 562 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 ZZEF1O43149 2961 aa8.63□□□□□ -1.03
USP28-215ENST00000545608 DOCK9Q9BZ29 2069 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 POM121BA6NF01 834 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FAM72CH0Y354 149 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 RAD51BO15315 384 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FFAR2O15552 330 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 PIAS2O75928 621 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 GFPT2O94808 682 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 MT-CO3P00414 261 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 MYF5P13349 255 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 ADRB3P13945 408 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 L1CAMP32004 1257 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 GKP32189 559 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 ADRA1BP35368 520 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 CCNHP51946 323 aaPredicted RBP8.62□□□□□ -1.03
USP28-215ENST00000545608 NEK3P51956 506 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 DAB2P98082 770 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FMO1Q01740 532 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 RTP5Q14D33 572 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 ACAP1Q15027 740 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 CDO1Q16878 200 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 C15orf59Q2T9L4 293 aaPredicted RBP8.62□□□□□ -1.03
USP28-215ENST00000545608 CCDC14Q49A88 953 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FAM72AQ5TYM5 149 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 MANEALQ5VSG8 457 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FAM72DQ6L9T8 149 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 Q6ZSR6 202 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 TMC6Q7Z403 805 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FAM72BQ86X60 149 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 CACTIN-AS1Q8N1I8 211 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 PCDH20Q8N6Y1 951 aaKnown RBP8.62□□□□□ -1.03
USP28-215ENST00000545608 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 OR4C6Q8NH72 309 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 JOSD2Q8TAC2 188 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 SLC30A5Q8TAD4 765 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 VOPP1Q96AW1 172 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 NXPE2Q96DL1 559 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 PPP1R16AQ96I34 528 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 FEM1CQ96JP0 617 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 SLC17A9Q9BYT1 436 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 TM6SF2Q9BZW4 377 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 NRSN2Q9GZP1 204 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 VPS16Q9H269 839 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 HECAQ9UBI9 543 aaPredicted RBP8.62□□□□□ -1.03
USP28-215ENST00000545608 DACH1Q9UI36 760 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 NOCTQ9UK39 431 aaKnown RBP8.62□□□□□ -1.03
USP28-215ENST00000545608 CLCA2Q9UQC9 943 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 HS3ST3A1Q9Y663 406 aa8.62□□□□□ -1.03
USP28-215ENST00000545608 SPEGQ15772 3267 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 IGLON5A6NGN9 336 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 EPHB6O15197 1021 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 MMP8P22894 467 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 ITGB7P26010 798 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
USP28-215ENST00000545608 EIF2S3P41091 472 aaKnown RBP8.61□□□□□ -1.03
USP28-215ENST00000545608 ABCG1P45844 678 aa8.61□□□□□ -1.03
USP28-215ENST00000545608 POLR2FP61218 127 aaKnown RBP8.61□□□□□ -1.03
USP28-215ENST00000545608 RPS21P63220 83 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms