RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 TUSC3Q13454 348 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 CRELD2Q6UXH1 353 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 NECAB2Q7Z6G3 386 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SPPL2AQ8TCT8 520 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 IRGQQ8WZA9 623 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PHF21BQ96EK2 531 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SNRNP25Q9BV90 132 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PRDM8Q9NQV8 689 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ARL15Q9NXU5 204 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ZNF232Q9UNY5 417 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 MYRFQ9Y2G1 1151 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ALOX15BO15296 676 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PIGNO95427 931 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SMIM10L2AP0DMW4 78 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 SMIM10L2BP0DMW5 78 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 NUP62P37198 522 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PTP4A2Q12974 167 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 OASLQ15646 514 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PDK4Q16654 411 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 INO80DQ53TQ3 878 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RIPOR1Q6ZS17 1223 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 R3HCC1LQ7Z5L2 792 aaKnown RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RORBQ92753 470 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TNFRSF25Q93038 417 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ART4Q93070 314 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PALMDQ9NP74 551 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ASAH2Q9NR71 780 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 CHST7Q9NS84 486 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 UBP1Q9NZI7 540 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 ANAPC2Q9UJX6 822 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 DUSP12Q9UNI6 340 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TBC1D30Q9Y2I9 924 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 RAP2CQ9Y3L5 183 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 TIMM13Q9Y5L4 95 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-207ENST00000544891 MYH8P13535 1937 aa9.11□□□□□ -0.95
NECAP1-207ENST00000544891 PSME4Q14997 1843 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 RBM47A0AV96 593 aaKnown RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ANKDD1BA6NHY2 528 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 HDAC3O15379 428 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 GCATO75600 419 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 USP17L7P0C7H9 530 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CDC25CP30307 473 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ATXN3P54252 364 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 FMO1Q01740 532 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ACOX1Q15067 660 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 DUSP28Q4G0W2 176 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SNX30Q5VWJ9 437 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 WSCD1Q658N2 575 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ARHGAP17Q68EM7 881 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 PPTC7Q8NI37 304 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 HASPINQ8TF76 798 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 KAT2BQ92831 832 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 BHMTQ93088 406 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 RNFT2Q96EX2 444 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 DEPDC7Q96QD5 511 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SHCBP1LQ9BZQ2 653 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 DHX33Q9H6R0 707 aaKnown RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 PRPF19Q9UMS4 504 aaKnown RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 GREB1LQ9C091 1923 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 hCG_1818297A0A087WSY0 165 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 KPNA3O00505 521 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 INPP4BO15327 924 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ATP6V1G2O95670 118 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 KRT75O95678 551 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CCDC130P13994 396 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CCNB1P14635 433 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 MYL12AP19105 171 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CYP3A5P20815 502 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 LPOP22079 712 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SOX10P56693 466 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 DUPD1Q68J44 220 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SYT12Q8IV01 421 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SLC44A2Q8IWA5 706 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 TCAIMQ8N3R3 496 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ST13P5Q8NFI4 369 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ITFG1Q8TB96 612 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 USP7Q93009 1102 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CD101Q93033 1021 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 MTERF3Q96E29 417 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 REEP1Q9H902 201 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 KCTD5Q9NXV2 234 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 CORO1CQ9ULV4 474 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 V9GYQ6 96 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 ZNF646O15015 1829 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 A0A0B4J269 797 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 RGS5O15539 181 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 SNX3O60493 162 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 PQBP1O60828 265 aaKnown RBP9.1□□□□□ -0.95
NECAP1-207ENST00000544891 OTCP00480 354 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 FYNP06241 537 aa9.1□□□□□ -0.95
NECAP1-207ENST00000544891 KELP23276 732 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms