RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 DYRK4Q9NR20 520 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 ADAM22Q9P0K1 906 aa16.54■□□□□ 0.24
DDX55-212ENST00000544738 K7ERQ8 282 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 MAGEC1O60732 1142 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 SDC3O75056 442 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 ERVPABLB-1P60509 514 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 PPP2CBP62714 309 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 PPP2CAP67775 309 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 GNA12Q03113 381 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 CDO1Q16878 200 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
DDX55-212ENST00000544738 PROX2Q3B8N5 592 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 CCDC14Q49A88 953 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 SETMARQ53H47 684 aaPredicted RBP16.53■□□□□ 0.24
DDX55-212ENST00000544738 AGBL4Q5VU57 503 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 NEK5Q6P3R8 708 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 LINGO4Q6UY18 593 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 PHF13Q86YI8 300 aaPredicted RBP16.53■□□□□ 0.24
DDX55-212ENST00000544738 OXR1Q8N573 874 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 OR7D4Q8NG98 312 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 CENPIQ92674 756 aaPredicted RBP16.53■□□□□ 0.24
DDX55-212ENST00000544738 VCPIP1Q96JH7 1222 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 OSBPL2Q9H1P3 480 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 ATP13A1Q9HD20 1204 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 ARHGAP20Q9P2F6 1191 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 DOPEY2Q9Y3R5 2298 aa16.53■□□□□ 0.24
DDX55-212ENST00000544738 UBR5O95071 2799 aaPredicted RBP16.53■□□□□ 0.24
DDX55-212ENST00000544738 PLXNA2O75051 1894 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 AHCTF1Q8WYP5 2266 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 ANKRD62A6NC57 917 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 KPNA3O00505 521 aaPredicted RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 TRIM38O00635 465 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 SMAD6O43541 496 aaKnown RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 RNGTTO60942 597 aaKnown RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 RHOQP17081 205 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 LSSP48449 732 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 STAT4Q14765 748 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 NCAPHQ15003 741 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 POM121L1PQ3SYA9 428 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 C6orf132Q5T0Z8 1188 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 ARTNQ5T4W7 220 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 C22orf39Q6P5X5 142 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 PHLDB2Q86SQ0 1253 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 DRC7Q8IY82 874 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 PCDH20Q8N6Y1 951 aaKnown RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 C3orf20Q8ND61 904 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 JOSD2Q8TAC2 188 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.24
DDX55-212ENST00000544738 PPP1R16AQ96I34 528 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 POLR1BQ9H9Y6 1135 aa16.52■□□□□ 0.24
DDX55-212ENST00000544738 DOCK4Q8N1I0 1966 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 SIGLEC16A6NMB1 481 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 PRAMEF26H0Y7S4 382 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 ZMPSTE24O75844 475 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 NTRK1P04629 796 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 CTSLP07711 333 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 MAT2AP31153 395 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 RFC1P35251 1148 aaPredicted RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 SERPINH1P50454 418 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 GEMIN4P57678 1058 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 MANEALQ5VSG8 457 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 RWDD4Q6NW29 188 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 TMC6Q7Z403 805 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 FAM172AQ8WUF8 416 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 NTAN1Q96AB6 310 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 THSD1Q9NS62 852 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
DDX55-212ENST00000544738 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
DDX55-212ENST00000544738 K7ENP7 123 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 OPA1O60313 960 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 CSO75390 466 aaKnown RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 FERP16591 822 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 DESP17661 470 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 GPD1P21695 349 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 TAS2R38P59533 333 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 TYRO3Q06418 890 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 ZNF211Q13398 564 aaPredicted RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 RAB6CQ53S08 254 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 ARSIQ5FYB1 569 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 PIP5KL1Q5T9C9 394 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 INO80CQ6PI98 192 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms