RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PTPN1P18031 435 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TRIM21P19474 475 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ITIH2P19823 946 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 POU3F2P20265 443 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 DGKAP23743 735 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CD82P27701 267 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 L1CAMP32004 1257 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PRPHP41219 470 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CD97P48960 835 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF131P52739 623 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SLC12A3P55017 1021 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ST8SIA6P61647 398 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TNNC1P63316 161 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 COG7P83436 770 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 POU4F1Q01851 419 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 KCNAB2Q13303 367 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ANKRD1Q15327 319 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SURF1Q15526 300 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TCEA2Q15560 299 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ZRSR1Q15695 479 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 IGFBP7Q16270 282 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 IFI16Q16666 785 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SKIDA1Q1XH10 827 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CLEC16AQ2KHT3 1053 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 HYIQ5T013 277 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CDKAL1Q5VV42 579 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 BORAQ6PGQ7 559 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CRELD2Q6UXH1 353 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 DSG4Q86SJ6 1040 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PTRH1Q86Y79 214 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 AHI1Q8N157 1196 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PLD6Q8N2A8 252 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SLC25A45Q8N413 288 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CPXM2Q8N436 756 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 KDM1BQ8NB78 822 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 B3GALNT2Q8NCR0 500 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 OR14C36Q8NHC7 312 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SCAMP5Q8TAC9 235 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 CXorf38Q8TB03 319 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 DDI1Q8WTU0 396 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SSC4DQ8WTU2 575 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 WBP2Q969T9 261 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SMARCD1Q96GM5 515 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TCTN2Q96GX1 697 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TNIP3Q96KP6 325 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 APOLD1Q96LR9 279 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 FAM213AQ9BRX8 229 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 MCMBPQ9BTE3 642 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 MED10Q9BTT4 135 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TM6SF1Q9BZW5 370 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF518BQ9C0D4 1074 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 RSPH9Q9H1X1 276 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 FOXP1Q9H334 677 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ST6GALNAC4Q9H4F1 302 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 EBF2Q9HAK2 575 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PRSS16Q9NQE7 514 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 KLHL11Q9NVR0 708 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ZC3H7BQ9UGR2 993 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SPTA1P02549 2419 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 DENND4CQ5VZ89 1909 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CEP192Q8TEP8 1941 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 COL6A6A6NMZ7 2263 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3DA0A087WVF3 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3IA0A087WXS9 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3EA0A087X179 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3KA0A087X1G2 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SLC12A8A0AV02 714 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ANKRD62A6NC57 917 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3FA6NER0 549 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 WASH4PA8MWX3 477 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 A8MXQ7 604 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 C10orf142B7Z368 130 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3LB9A6J9 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ANKRD63C9JTQ0 380 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PRAMEF26H0Y7S4 382 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 H3BS24 57 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PLD2O14939 933 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PPP1R12AO14974 1030 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 KIAA0391O15091 583 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SCAMP1O15126 338 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 MID1O15344 667 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 NVLO15381 856 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 FFAR2O15552 330 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SLC7A4O43246 635 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SLC26A4O43511 780 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 LATO43561 262 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 DLX3O60479 287 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 VPS4BO75351 444 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PIAS2O75928 621 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 STC2O76061 302 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CTDNEP1O95476 244 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 DDAH2O95865 285 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBX18O95935 607 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3HP0C7X1 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 JMJD7P0C870 316 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 RALAP11233 206 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 RARGP13631 454 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms