RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ANKRD20A1Q5TYW2 823 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 ANKRD20A3Q5VUR7 823 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 GRAMD4Q6IC98 578 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PPP1R21Q6ZMI0 780 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PRR23BQ6ZRT6 265 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TPRG1Q6ZUI0 275 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PID1Q7Z2X4 250 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 HOOK3Q86VS8 718 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 OR7D4Q8NG98 312 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 CSGALNACT1Q8TDX6 532 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 BHMTQ93088 406 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 MSANTD3Q96H12 275 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TEKT5Q96M29 485 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 LRRC3BQ96PB8 259 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TRIM51Q9BSJ1 452 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 IER2Q9BTL4 223 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 BRD9Q9H8M2 597 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 GDF3Q9NR23 364 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 DEC1Q9P2X7 70 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 MTRF1LQ9UGC7 380 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 DMGDHQ9UI17 866 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 SLC25A13Q9UJS0 675 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 GGA2Q9UJY4 613 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 FBXO10Q9UK96 956 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 SLC8A2Q9UPR5 921 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 SHOC2Q9UQ13 582 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 SLC27A6Q9Y2P4 619 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 NEU2Q9Y3R4 380 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 OR51B4Q9Y5P0 310 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 LAMA5O15230 3695 aa9.68□□□□□ -0.86
YBX3-215ENST00000544504 DSPP15924 2871 aaKnown RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
YBX3-215ENST00000544504 DMXL2Q8TDJ6 3036 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 UQCRHLA0A096LP55 91 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 A0A0D9SEW6 157 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 KCNK1O00180 336 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 AP3B1O00203 1094 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 CBX4O00257 560 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 DNALI1O14645 258 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 SEC31AO94979 1220 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 ATP5BP06576 529 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 UQCRHP07919 91 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ARSAP15289 507 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 POLR2EP19388 210 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 PTPN3P26045 913 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ACVRL1P37023 503 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 NNMTP40261 264 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 TNNT3P45378 269 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 MMP13P45452 471 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 LIMK1P53667 647 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 LMAN2Q12907 356 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 FZD5Q13467 585 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 SIM2Q14190 667 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.86
YBX3-215ENST00000544504 BRD3Q15059 726 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ELF2Q15723 593 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 SLC14A2Q15849 920 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 FSCBQ5H9T9 825 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 RALGPS1Q5JS13 557 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 IZUMO3Q5VZ72 239 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 KIAA0907Q7Z7F0 614 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 PPIL6Q8IXY8 311 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ZNF567Q8N184 647 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 CCDC33Q8N5R6 958 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 TEX26Q8N6G2 289 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 DNASE1L2Q92874 299 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ALG14Q96F25 216 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 CINPQ9BW66 212 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 POLR1EQ9GZS1 481 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 GBA3Q9H227 469 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 DPH5Q9H2P9 285 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 EBF3Q9H4W6 596 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ANKZF1Q9H8Y5 726 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 PDFQ9HBH1 243 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 EIF2B3Q9NR50 452 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ABCB8Q9NUT2 735 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 DNAJC17Q9NVM6 304 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 RBM22Q9NW64 420 aaKnown RBP eCLIP9.67□□□□□ -0.86
YBX3-215ENST00000544504 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
YBX3-215ENST00000544504 RSPH14Q9UHP6 348 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ANAPC5Q9UJX4 755 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 RAB21Q9UL25 225 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 ZMIZ1Q9ULJ6 1067 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 AAR2Q9Y312 384 aaKnown RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 SNX24Q9Y343 169 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 V9GYY5 206 aaPredicted RBP9.67□□□□□ -0.86
YBX3-215ENST00000544504 FREM2Q5SZK8 3169 aa9.67□□□□□ -0.86
YBX3-215ENST00000544504 NUP205Q92621 2012 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CHD5Q8TDI0 1954 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 MIA3Q5JRA6 1907 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 CCDC151A5D8V7 595 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 J3KR12 359 aa9.66□□□□□ -0.86
YBX3-215ENST00000544504 TULP3O75386 442 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms