RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NR1H3Q13133 447 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 RANBP10Q6VN20 620 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 TMC8Q8IU68 726 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 IMP4Q96G21 291 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 TRMT2BQ96GJ1 504 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 SUDS3Q9H7L9 328 aaPredicted RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 COPEO14579 308 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PRAMEF11O60813 436 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 RHOCP08134 193 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ITGA2BP08514 1039 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 HTR7P34969 479 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 IRF9Q00978 393 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 SEPT7Q16181 437 aaKnown RBP13.86□□□□□ -0.19
HCFC2-202ENST00000544223 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF789Q5FWF6 425 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 CXorf57Q6NSI4 855 aaKnown RBP13.86□□□□□ -0.19
HCFC2-202ENST00000544223 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ZCCHC23Q6ZST2 131 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 RAD9AQ99638 391 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 NOD2Q9HC29 1040 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 COMMD8Q9NX08 183 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 FETUBQ9UGM5 382 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 FNDC3AQ9Y2H6 1198 aaKnown RBP13.86□□□□□ -0.19
HCFC2-202ENST00000544223 CHD5Q8TDI0 1954 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 H0Y626 953 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 EFCAB14O75071 495 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ANXA9O76027 345 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PRSS56P0CW18 603 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 BGNP21810 368 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 GABRB3P28472 473 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PDE1BQ01064 536 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 IL9RQ01113 521 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 MGAT5Q09328 741 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF235Q14590 738 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ANO4Q32M45 955 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 SIRPB2Q5JXA9 342 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF276Q8N554 614 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ING5Q8WYH8 240 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 IL22Q9GZX6 179 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 SLC25A51Q9H1U9 297 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PRDM4Q9UKN5 801 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 PCDHGC4Q9Y5F7 938 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ARL5AQ9Y689 179 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 FAM169AQ9Y6X4 670 aa13.86□□□□□ -0.19
HCFC2-202ENST00000544223 ANKRD36A6QL64 1941 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 GOLGA8CPA6NN73 597 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PDHA1P08559 390 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 GKP32189 559 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 BMPR1AP36894 532 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 NEK3P51956 506 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 KPNA1P52294 538 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF177Q13360 481 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PDE1CQ14123 709 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PARP15Q460N3 678 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 RNF187Q5TA31 235 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 FSTL4Q6MZW2 842 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 APCDD1Q8J025 514 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 SPPL3Q8TCT6 385 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PLD4Q96BZ4 506 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 APOPT1Q96IL0 206 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 MAGEB18Q96M61 343 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 FNIP2Q9P278 1114 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 SOX13Q9UN79 622 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 CHKBQ9Y259 395 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 FCF1Q9Y324 198 aaKnown RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 DENND4CQ5VZ89 1909 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 A6NNZ2 444 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 KRT38O76015 456 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 USP1O94782 785 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 CA3P07451 260 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PBX2P40425 430 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 GEMP55040 296 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 CDH4P55283 916 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 IL10RBQ08334 325 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 RASA2Q15283 850 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 TUBB8Q3ZCM7 444 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 SPANXN3Q5MJ09 141 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 RABGAP1LQ5R372 815 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 GKAP1Q5VSY0 366 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 PLD6Q8N2A8 252 aaKnown RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
HCFC2-202ENST00000544223 CCDC63Q8NA47 563 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 BLOC1S5Q8TDH9 187 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 DDI1Q8WTU0 396 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 OVCA2Q8WZ82 227 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF75CPQ92670 426 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms