RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 EPHB3P54753 998 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ERVFC1P60507 584 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 MPP1Q00013 466 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 IRF9Q00978 393 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ITIH4Q14624 930 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 PTPRCAPQ14761 206 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ZCCHC23Q6ZST2 131 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 CCDC121Q6ZUS5 278 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 C10orf67Q8IYJ2 551 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ANKS4BQ8N8V4 417 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 CEP295NLQ96MC4 621 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ZBED2Q9BTP6 218 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 TCAF1Q9Y4C2 921 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 PCDHB12Q9Y5F1 795 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 AURKAO14965 403 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 PSMD3O43242 534 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 BUD23O43709 281 aaKnown RBP17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 GREM1O60565 184 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 SAT1P21673 171 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 MPP3Q13368 585 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 SPATS2Q86XZ4 545 aaKnown RBP17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 MCMBPQ9BTE3 642 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 C20orf27Q9GZN8 174 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 SMG9Q9H0W8 520 aaKnown RBP17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 ATP13A1Q9HD20 1204 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 NPHS2Q9NP85 383 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 SNX15Q9NRS6 342 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 TRANK1O15050 2925 aa17.47■□□□□ 0.39
TMEM50B-210ENST00000542230 CXCL14O95715 111 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 AHSGP02765 367 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 DNAJB1P25685 340 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 TYK2P29597 1187 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 YBEYP58557 167 aaPredicted RBP17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 SIRPB2Q5JXA9 342 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 N4BP2L1Q5TBK1 243 aaPredicted RBP17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 LINGO4Q6UY18 593 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 TRPM8Q7Z2W7 1104 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 FIBCD1Q8N539 461 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 FITM2Q8N6M3 262 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 RFWD2Q8NHY2 731 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 WFDC5Q8TCV5 224 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 PLD4Q96BZ4 506 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 NUMBLQ9Y6R0 609 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 CTSAP10619 480 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 NEFHP12036 1026 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 GABRR2P28476 465 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 LIMK2P53671 638 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 CDH4P55283 916 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 GRTP1Q5TC63 336 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 CXorf57Q6NSI4 855 aaKnown RBP17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 TMC7Q7Z402 723 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 YTHDF3Q7Z739 585 aaKnown RBP17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 MFSD6LQ8IWD5 586 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 MAB21L3Q8N8X9 362 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 TREX1Q9NSU2 369 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 DCTN4Q9UJW0 460 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 ARL2BPQ9Y2Y0 163 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 STARD13Q9Y3M8 1113 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 CPQQ9Y646 472 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 PLXNA4Q9HCM2 1894 aa17.46■□□□□ 0.39
TMEM50B-210ENST00000542230 C2orf71A6NGG8 1288 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 CBX4O00257 560 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 SNAP91O60641 907 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 FGBP02675 491 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 ATXN1LP0C7T5 689 aaKnown RBP17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 SYN1P17600 705 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 HDCP19113 662 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 GALNT3Q14435 633 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 GRM3Q14832 879 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 TMCO4Q5TGY1 634 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 FATE1Q969F0 183 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 TADA1Q96BN2 335 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 HCFC1R1Q9NWW0 138 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 TMEM216Q9P0N5 145 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 BMP1P13497 986 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 KCNA4P22459 653 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 CNTFP26441 200 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 MZF1P28698 734 aaPredicted RBP17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 HTRA4P83105 476 aaPredicted RBP17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF235Q14590 738 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF460Q14592 562 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF789Q5FWF6 425 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 RABGAP1LQ5R372 815 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 ATG14Q6ZNE5 492 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 TNS4Q8IZW8 715 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 NSMCE1Q8WV22 266 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 VPS39Q96JC1 886 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 TMEM106CQ9BVX2 250 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 RXFP1Q9HBX9 757 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 NOD2Q9HC29 1040 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 DONSONQ9NYP3 566 aa17.45■□□□□ 0.38
TMEM50B-210ENST00000542230 DNAJC6O75061 913 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms