RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PGPEP1LA6NFU8 196 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 KIF1CO43896 1103 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 TMCC1O94876 653 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 RTN3O95197 1032 aaPredicted RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 HNRNPA1P09651 372 aaKnown RBP eCLIP3.46□□□□□ -1.86
USP28-210ENST00000542033 PSG1P11464 419 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 CHMP24386 653 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TBXAS1P24557 533 aaPredicted RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 PRKCHP24723 683 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TBL3Q12788 808 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 HNRNPA0Q13151 305 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 IL13RA2Q14627 380 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 PTGR1Q14914 329 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 PRTGQ2VWP7 1150 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 ZNF260Q3ZCT1 412 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 GPATCH4Q5T3I0 446 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 CTR9Q6PD62 1173 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 C16orf54Q6UWD8 224 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 GLCCI1Q86VQ1 547 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 CAMK1DQ8IU85 385 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 FAM217AQ8IXS0 508 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 GHDCQ8N2G8 530 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 ZMIZ2Q8NF64 920 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TDRD7Q8NHU6 1098 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 FAR1Q8WVX9 515 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 LPAR1Q92633 364 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 ITFG2Q969R8 447 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 SLC25A28Q96A46 364 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 ZUFSPQ96AP4 578 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 RNFT2Q96EX2 444 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TIGD1Q96MW7 591 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TEFMQ96QE5 360 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 SERINC2Q96SA4 455 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 BARD1Q99728 777 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 NUDT16L1Q9BRJ7 211 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 STN1Q9H668 368 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 IL21RQ9HBE5 538 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 TLR8Q9NR97 1041 aaKnown RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 ALKBH4Q9NXW9 302 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 CD207Q9UJ71 328 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 CDH22Q9UJ99 828 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 RAP2CQ9Y3L5 183 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 UNC13AQ9UPW8 1703 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 TRBV5-7A0A0A0MS05 114 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 A0A1W2PPH5 198 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 FSD2A1L4K1 749 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 OR6C68A6NDL8 312 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 VGLL3A8MV65 326 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 DHX16O60231 1041 aaKnown RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 GFPT2O94808 682 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 EPN2O95208 641 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 DDAH2O95865 285 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 IL1AP01583 271 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 PSMC2P35998 433 aaKnown RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 GJC1P36383 396 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 MTNR1AP48039 350 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 CLCNKBP51801 687 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 POU5F1Q01860 360 aaKnown RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 KRT32Q14532 448 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 CDC37Q16543 378 aaPredicted RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 BAK1Q16611 211 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 SLC45A4Q5BKX6 768 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 WDR45BQ5MNZ6 344 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 AWAT2Q6E213 333 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 IRF2BP2Q7Z5L9 587 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 WDR5BQ86VZ2 330 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 ARMC8Q8IUR7 673 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 LRRC57Q8N9N7 239 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 ANKRD52Q8NB46 1076 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 LSM14AQ8ND56 463 aaKnown RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 MNS1Q8NEH6 495 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 NSMCE1Q8WV22 266 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 ZBTB9Q96C00 473 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 MSI2Q96DH6 328 aaKnown RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 CD180Q99467 661 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 TTC12Q9H892 705 aaPredicted RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 ZDHHC7Q9NXF8 308 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 TBC1D14Q9P2M4 693 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 ORC3Q9UBD5 711 aaPredicted RBP3.45□□□□□ -1.86
USP28-210ENST00000542033 ICKQ9UPZ9 632 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 OSGIN2Q9Y236 505 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 CYP46A1Q9Y6A2 500 aa3.45□□□□□ -1.86
USP28-210ENST00000542033 TDRD9Q8NDG6 1382 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 FAM90A10PA6NDY2 464 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 GAGE12JA6NER3 117 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 B4DGG1 531 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 H0YGN5 161 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 MDM4O15151 490 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 RNMTO43148 476 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 USO1O60763 962 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 TMCC2O75069 709 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 ATG13O75143 517 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 OAZ2O95190 189 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 IFNA2P01563 188 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 CRYABP02511 175 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 KLKB1P03952 638 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 CCDC172P0C7W6 258 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 YWHAQP27348 245 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 TNFSF8P32971 234 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 HNF1BP35680 557 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms