RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZSCAN5CA6NGD5 496 aaPredicted RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 ARHGAP42A6NI28 874 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 C4orf47A7E2U8 309 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 C1QTNF3-AMACRE9PGA6 284 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 KRIT1O00522 736 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 SLC30A4O14863 429 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 BCAT2O15382 392 aaPredicted RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 SPINT1O43278 529 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 POP4O95707 220 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 GSRP00390 522 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 PRNPP04156 253 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 WNT1P04628 370 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 COMTP21964 271 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 KDELR1P24390 212 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 CD27P26842 260 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 HOXD12P35452 270 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ARL4AP40617 200 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ZNF135P52742 658 aaPredicted RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 GEMIN4P57678 1058 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 SLC10A7Q0GE19 358 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 KRT81Q14533 505 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 HADHQ16836 314 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 NCBP2-AS2Q69YL0 99 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 TMCO3Q6UWJ1 677 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ERN2Q76MJ5 926 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 RYBPQ8N488 228 aaPredicted RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 ACRBPQ8NEB7 543 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 CEP76Q8TAP6 659 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 SNX19Q92543 992 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 FAF2Q96CS3 445 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 EDEM2Q9BV94 578 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ZDHHC6Q9H6R6 413 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 IL21RQ9HBE5 538 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 TM9SF3Q9HD45 589 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 ZFR2Q9UPR6 939 aaKnown RBP9.88□□□□□ -0.83
YBX3-212ENST00000542002 ALG6Q9Y672 507 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 NUMA1Q14980 2115 aa9.88□□□□□ -0.83
YBX3-212ENST00000542002 A0A1B0GTW7 788 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 A0A1B0GVT2 93 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 A0A1W2PPC4 97 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 LRRC72A6NJI9 287 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 C16orf96A6NNT2 1141 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 KCNK3O14649 394 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 SLC7A4O43246 635 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 LATO43561 262 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 PALMO75781 387 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 MAP3K6O95382 1288 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 PIGNO95427 931 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 UGT2B4P06133 528 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 KRT7P08729 469 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 TIMP2P16035 220 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 ITGB7P26010 798 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 MAT2AP31153 395 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 ABL2P42684 1182 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 MAPK8P45983 427 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 RECQLP46063 649 aaPredicted RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 NOP2P46087 812 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 CCR5P51681 352 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 LIMK1P53667 647 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 HADHBP55084 474 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 RHOAP61586 193 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 SNRPD1P62314 119 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 GBE1Q04446 702 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 IL10RBQ08334 325 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 IHHQ14623 411 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 PAFAH1B3Q15102 231 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 PDK2Q15119 407 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 SPA17Q15506 151 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 ZNF284Q2VY69 593 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 LRRC73Q5JTD7 316 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 GDPD4Q6W3E5 623 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 PARS2Q7L3T8 475 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 CAMK1DQ8IU85 385 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 PGBD5Q8N414 524 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 LZTR1Q8N653 840 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 NETO1Q8TDF5 533 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 CASKIN2Q8WXE0 1202 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 KLK6Q92876 244 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 CCDC114Q96M63 670 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 SLC6A18Q96N87 628 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 KLHL32Q96NJ5 620 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 RNF157Q96PX1 679 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 BAG1Q99933 345 aaPredicted RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 NUSAP1Q9BXS6 441 aaKnown RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 CALN1Q9BXU9 219 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 CAAP1Q9H8G2 361 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 RCOR3Q9P2K3 495 aaPredicted RBP9.87□□□□□ -0.83
YBX3-212ENST00000542002 IMPACTQ9P2X3 320 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 GGT7Q9UJ14 662 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 CA5BQ9Y2D0 317 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 FADS3Q9Y5Q0 445 aa9.87□□□□□ -0.83
YBX3-212ENST00000542002 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 CHD5Q8TDI0 1954 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms