RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 IFI44Q8TCB0 444 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 WFIKKN2Q8TEU8 576 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 RNF139Q8WU17 664 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 CDK5RAP1Q96SZ6 601 aaKnown RBP9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 AGPAT1Q99943 283 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 EDEM3Q9BZQ6 932 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 DCLK3Q9C098 648 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 NEUROG2Q9H2A3 272 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 NLGN3Q9NZ94 848 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 NCKIPSDQ9NZQ3 722 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 MYO6Q9UM54 1294 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 PLAAQ9Y263 795 aa9.09□□□□□ -0.95
TRAPPC1-202ENST00000540486 MSI1O43347 362 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 GRAP2O75791 330 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 IGLV3-27P01718 113 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 HMBSP08397 361 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 GIMD1P0DJR0 217 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 SKILP12757 684 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 FERP16591 822 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC6A3Q01959 620 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 PTP4A2Q12974 167 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 KCNAB2Q13303 367 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 EIF3IQ13347 325 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 STAT4Q14765 748 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 TGIF1Q15583 401 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 EFHC1Q5JVL4 640 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 RSRC2Q7L4I2 434 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 TADA2BQ86TJ2 420 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF366Q8N895 744 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC30A5Q8TAD4 765 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 CPLX3Q8WVH0 158 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 FAM149B1Q96BN6 582 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 C18orf8Q96DM3 657 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC2A13Q96QE2 648 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 OMDQ99983 421 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 POPDC2Q9HBU9 364 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 OLA1Q9NTK5 396 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 KLHL11Q9NVR0 708 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 CUEDC1Q9NWM3 386 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 AGO1Q9UL18 857 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 CAPN11Q9UMQ6 739 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 DMTF1Q9Y222 760 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 CELSR2Q9HCU4 2923 aa9.08□□□□□ -0.96
TRAPPC1-202ENST00000540486 PLXNA2O75051 1894 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 LY6G6EA0A0G2JKS1 128 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 A0A1W2PP55 124 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 PLD2O14939 933 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SCAMP1O15126 338 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 FFAR2O15552 330 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SART1O43290 800 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 RNASEH2AO75792 299 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 LSM8O95777 96 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 IGLV3-25P01717 112 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 ATP5BP06576 529 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 GLI1P08151 1106 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 DLDP09622 509 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 GOT1P17174 413 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 MMP8P22894 467 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CORO1AP31146 461 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 PRKCIP41743 596 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SRSF6Q13247 344 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CST6Q15828 149 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF787Q6DD87 383 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 TRNP1Q6NT89 227 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SND1Q7KZF4 910 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC26A9Q7LBE3 791 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 ZNF571Q7Z3V5 609 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 PHLDB2Q86SQ0 1253 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 XYLT1Q86Y38 959 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 DENND1CQ8IV53 801 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CPXM2Q8N436 756 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 DQX1Q8TE96 717 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CYB5D2Q8WUJ1 264 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 HTR3CQ8WXA8 447 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 FCRL2Q96LA5 508 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 HAUS4Q9H6D7 363 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 ASNSD1Q9NWL6 643 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 UCKL1Q9NWZ5 548 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 TAS2R14Q9NYV8 317 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 ARHGAP20Q9P2F6 1191 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 SERGEFQ9UGK8 458 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 STOML2Q9UJZ1 356 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 TMEM59LQ9UK28 342 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 STRIP2Q9ULQ0 834 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 HBS1LQ9Y450 684 aaKnown RBP9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 CEP83Q9Y592 693 aa9.07□□□□□ -0.96
TRAPPC1-202ENST00000540486 U3KQA8 63 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms