RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	OR2AP1	Q8NGE2	309 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	GRIN3A	Q8TCU5	1115 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	CASKIN2	Q8WXE0	1202 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	CNDP2	Q96KP4	475 aa	Known RBP	13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	BMF	Q96LC9	184 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	AIPL1	Q9NZN9	384 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	FZD10	Q9ULW2	581 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	FCF1	Q9Y324	198 aa	Known RBP	13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	MFHAS1	Q9Y4C4	1052 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	ACTL7A	Q9Y615	435 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	ACACA	Q13085	2346 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	LOC400499	M0QZD8	3231 aa		13.34	□□□□□ -0.27
SEMA4D-223	ENST00000540475	ANKRD36	A6QL64	1941 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475		A0A1W2PQC6	194 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SLC31A1	O15431	190 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	POP4	O95707	220 aa	Known RBP	13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	THEGL	P0DJG4	465 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	GIMD1	P0DJR0	217 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	GZMA	P12544	262 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	AKT2	P31751	481 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PRKCI	P41743	596 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SNRPD1	P62314	119 aa	Known RBP	13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	OGDH	Q02218	1023 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FGL2	Q14314	439 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	MYLK3	Q32MK0	819 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PROX2	Q3B8N5	592 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ANO6	Q4KMQ2	910 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ZNF805	Q5CZA5	627 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EFHC2	Q5JST6	749 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SEL1L3	Q68CR1	1132 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PLEKHA7	Q6IQ23	1121 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DNAJC24	Q6P3W2	148 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	GCNT7	Q6ZNI0	430 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PARS2	Q7L3T8	475 aa	Known RBP	13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	UMODL1-AS1	Q8N2C9	162 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PYROXD2	Q8N2H3	581 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	RFFL	Q8WZ73	363 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FEM1C	Q96JP0	617 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	KLF6	Q99612	283 aa	Predicted RBP	13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	C1QTNF2	Q9BXJ5	285 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	OSBPL1A	Q9BXW6	950 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SLC17A9	Q9BYT1	436 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	CCDC86	Q9H6F5	360 aa	Known RBP	13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	HPCAL4	Q9UM19	191 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	CA5B	Q9Y2D0	317 aa		13.33	□□□□□ -0.28
SEMA4D-223	ENST00000540475	APC2	O95996	2303 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475		A0A1B0GTH6	734 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	C16orf96	A6NNT2	1141 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SMTNL1	A8MU46	457 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EIF3CL	B5ME19	914 aa	Known RBP	13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	AREL1	O15033	823 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SPINT1	O43278	529 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TSPAN6	O43657	245 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PCDH8	O95206	1070 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PRLR	P16471	622 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ACP1	P24666	158 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ZNF211	Q13398	564 aa	Predicted RBP	13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	MAMLD1	Q13495	774 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PARP15	Q460N3	678 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FBXL19	Q6PCT2	694 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DHRS13	Q6UX07	377 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	KYAT3	Q6YP21	454 aa	Known RBP	13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SLC22A18AS	Q8N1D0	253 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	OR13H1	Q8NG92	308 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	HCAR2	Q8TDS4	363 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	KLK6	Q92876	244 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	MCEE	Q96PE7	176 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EIF3C	Q99613	913 aa	Known RBP	13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FUCA2	Q9BTY2	467 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EDEM3	Q9BZQ6	932 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TTYH3	Q9C0H2	523 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	LRRC19	Q9H756	370 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PARVA	Q9NVD7	372 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TAS2R14	Q9NYV8	317 aa		13.32	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ANKRD62	A6NC57	917 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TRABD2B	A6NFA1	517 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	GOLGA8CP	A6NN73	597 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FGF10	O15520	208 aa	Predicted RBP	13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	RFPL3	O75679	317 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PAK4	O96013	591 aa	Predicted RBP	13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	CKMT2	P17540	419 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TNFAIP3	P21580	790 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DGKA	P23743	735 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EPHB2	P29323	1055 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ABL2	P42684	1182 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DNA2	P51530	1060 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DNAJC3	Q13217	504 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	SERINC3	Q13530	473 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	NR1I3	Q14994	352 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	IQCB1	Q15051	598 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FIGN	Q5HY92	759 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	ARFGAP1	Q8N6T3	406 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	PDCD7	Q8N8D1	485 aa	Known RBP	13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	DENND6B	Q8NEG7	585 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	OR4C6	Q8NH72	309 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	FNIP1	Q8TF40	1166 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	EPAS1	Q99814	870 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	CPEB1	Q9BZB8	566 aa	Known RBP	13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	TM6SF2	Q9BZW4	377 aa		13.31	□□□□□ -0.28
SEMA4D-223	ENST00000540475	KLC2	Q9H0B6	622 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms