RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 SLC12A2P55011 1212 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 CDH13P55290 713 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 ARPP19P56211 112 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 BTKQ06187 659 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 GALNT2Q10471 571 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 CYLC2Q14093 348 aaPredicted RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 NRF1Q16656 503 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 FSCN1Q16658 493 aaKnown RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 INSCQ1MX18 579 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 TMCO4Q5TGY1 634 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 LIPMQ5VYY2 423 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 PIM3Q86V86 326 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 MIB1Q86YT6 1006 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 LSMEM2Q8N112 164 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 SREK1Q8WXA9 508 aaKnown RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 SMARCD1Q96GM5 515 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 RTP3Q9BQQ7 232 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 NT5MQ9NPB1 228 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
BNIP3-202ENST00000540159 PTGDR2Q9Y5Y4 395 aa13.83□□□□□ -0.2
BNIP3-202ENST00000540159 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CCNT2O60583 730 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 FKBP6O75344 327 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 STMN1P16949 149 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 VCLP18206 1134 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CRABP2P29373 138 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CEACAM7Q14002 265 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 PGM2L1Q6PCE3 622 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CLEC14AQ86T13 490 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 PDSS2Q86YH6 399 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 H3BNX3 289 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 M0QZ92 97 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 TOMM70O94826 608 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 ZNF865P0CJ78 1059 aaPredicted RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 SCNN1AP37088 669 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 GRIA2P42262 883 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 LBRQ14739 615 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 DDR2Q16832 855 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 TSTD2Q5T7W7 516 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 BTBD8Q5XKL5 378 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 KYQ8NBH2 561 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 RHOJQ9H4E5 214 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 J3KR12 359 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 MGEA5O60502 916 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 MPOP05164 745 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 MTTPP55157 894 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 ADAM17P78536 824 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 GEN1Q17RS7 908 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 NAT14Q8WUY8 206 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 GPR22Q99680 433 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 NMUR1Q9HB89 426 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 ACTL7AQ9Y615 435 aa13.82□□□□□ -0.2
BNIP3-202ENST00000540159 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
BNIP3-202ENST00000540159 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 DDHD2O94830 711 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 YWHAQP27348 245 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 THPOP40225 353 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 ALDH1A3P47895 512 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 FOLH1Q04609 750 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 C6orf52Q5T4I8 152 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 BNIPLQ7Z465 357 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 OLFM1Q99784 485 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 TRIM4Q9C037 500 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 DNAI2Q9GZS0 605 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
BNIP3-202ENST00000540159 RAP2CQ9Y3L5 183 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 PPP6CO00743 305 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 CCDC166P0CW27 439 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 GRK4P32298 578 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 LHX1P48742 406 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 CDK7P50613 346 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 SLC5A3P53794 718 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 RAB10P61026 200 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 SLC12A1Q13621 1099 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 STXBP5Q5T5C0 1151 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 PKN3Q6P5Z2 889 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 BNC2Q6ZN30 1099 aaPredicted RBP13.81□□□□□ -0.2
BNIP3-202ENST00000540159 TRIM67Q6ZTA4 783 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 ARHGAP12Q8IWW6 846 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 ICA1LQ8NDH6 482 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 OR52K2Q8NGK3 314 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms