RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC7A4O43246 635 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 NDUFA10O95299 355 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3HP0C7X1 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 GNSP15586 552 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 CD27P26842 260 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 CYLC1P35663 651 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 RGRP47804 291 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 LIMK1P53667 647 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 RHOAP61586 193 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 BNC1Q01954 994 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3GQ6DHY5 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3CQ6IPX1 549 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 ERN2Q76MJ5 926 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 RABEPKQ7Z6M1 372 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TMTC1Q8IUR5 882 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TBC1D3Q8IZP1 549 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 KCTD6Q8NC69 237 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 OR2I1PQ8NGU4 316 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 PCDH19Q8TAB3 1148 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 RAPGEF5Q92565 580 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 EXOC2Q96KP1 924 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 CALN1Q9BXU9 219 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 HDAC8Q9BY41 377 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 TM9SF3Q9HD45 589 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 RCOR3Q9P2K3 495 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 SUSD2Q9UGT4 822 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 IPO11Q9UI26 975 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 SALL4Q9UJQ4 1053 aa18.58■□□□□ 0.56
SNRPA1-203ENST00000540017 PLXNA2O75051 1894 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A1W2PPC4 97 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 POP4O95707 220 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 KRT7P08729 469 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 ITGB7P26010 798 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 MAPK8P45983 427 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 CSNK1EP49674 416 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 CCR5P51681 352 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 SPA17Q15506 151 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 ANKRD20A8PQ5CZ79 823 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 LAYNQ6UX15 382 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 PARS2Q7L3T8 475 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 FAF2Q96CS3 445 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 GDAP1L1Q96MZ0 367 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 KDM4CQ9H3R0 1056 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 GOLPH3Q9H4A6 298 aa18.57■□□□□ 0.56
SNRPA1-203ENST00000540017 C3orf70A6NLC5 250 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 ARHGAP33O14559 1287 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 TM4SF5O14894 197 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 WNT9AO14904 365 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 MUSKO15146 869 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 LATO43561 262 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 MFSD11O43934 449 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 BUB1BO60566 1050 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 PALMO75781 387 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 PEX11BO96011 259 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 UGT2B4P06133 528 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 COMTP21964 271 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 KDELR1P24390 212 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 HADHBP55084 474 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 IL10RBQ08334 325 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 PUM1Q14671 1186 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 PDK2Q15119 407 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 NCBP2-AS2Q69YL0 99 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 PQLC3Q8N755 202 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 TSEN2Q8NCE0 465 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 ZNF670Q9BS34 389 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 GTPBP2Q9BX10 602 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 SP110Q9HB58 689 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 TMEM9BQ9NQ34 198 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 DYRK4Q9NR20 520 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 IMPACTQ9P2X3 320 aa18.56■□□□□ 0.56
SNRPA1-203ENST00000540017 DOCK9Q9BZ29 2069 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 DCDC2BA2VCK2 349 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 C16orf96A6NNT2 1141 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 MAFKO60675 156 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 GJB3O75712 270 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 IGSF6O95976 241 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 ADRB3P13945 408 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 MAT2AP31153 395 aaKnown RBP18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 NOP2P46087 812 aaKnown RBP18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 NEK3P51956 506 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 SLC10A7Q0GE19 358 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 GRIK2Q13002 908 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 ZNF805Q5CZA5 627 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 ACRBPQ8NEB7 543 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 PPP1R16AQ96I34 528 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 LRIG1Q96JA1 1093 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 NSMCE3Q96MG7 304 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 SLC6A18Q96N87 628 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 KLHL32Q96NJ5 620 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 BAG1Q99933 345 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 RTKNQ9BST9 563 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 DUSP10Q9Y6W6 482 aa18.55■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A0A6YYK5 440 aaPredicted RBP18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A1B0GVT2 93 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 SPINT1O43278 529 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 RNGTTO60942 597 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 MAP3K6O95382 1288 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 PIGNO95427 931 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 WNT1P04628 370 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms