RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MRPL43Q8N983 215 aaKnown RBP22.74■■□□□ 1.23
HOMER3-204ENST00000539827 ZNF599Q96NL3 588 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 SRPK1Q96SB4 655 aaKnown RBP22.74■■□□□ 1.23
HOMER3-204ENST00000539827 CPNE1Q99829 537 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 VPS45Q9NRW7 570 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 UBA2Q9UBT2 640 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-204ENST00000539827 MIA3Q5JRA6 1907 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 CKMP06732 381 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 ITGA2BP08514 1039 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 PDK4Q16654 411 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 GRTP1Q5TC63 336 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 ESRP1Q6NXG1 681 aaKnown RBP22.74■■□□□ 1.23
HOMER3-204ENST00000539827 NDUFAF2Q8N183 169 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 PHOSPHO2Q8TCD6 241 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 MICAL1Q8TDZ2 1067 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 POLR1EQ9GZS1 481 aaKnown RBP22.74■■□□□ 1.23
HOMER3-204ENST00000539827 SLC2A6Q9UGQ3 507 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 LZTS1Q9Y250 596 aa22.74■■□□□ 1.23
HOMER3-204ENST00000539827 LATS1O95835 1130 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 ABCG1P45844 678 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 PPM1LQ5SGD2 360 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 CXorf57Q6NSI4 855 aaKnown RBP22.73■■□□□ 1.23
HOMER3-204ENST00000539827 Q6ZNB5 142 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 FAM47EQ6ZV65 393 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 SETD3Q86TU7 594 aaPredicted RBP22.73■■□□□ 1.23
HOMER3-204ENST00000539827 ATP2A3Q93084 1043 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 TADA1Q96BN2 335 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 ATXN7L3BQ96GX2 97 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 IQCGQ9H095 443 aaKnown RBP22.73■■□□□ 1.23
HOMER3-204ENST00000539827 MUC3BQ9H195 1237 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 HCFC1R1Q9NWW0 138 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 TBC1D30Q9Y2I9 924 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 IRAK3Q9Y616 596 aa22.73■■□□□ 1.23
HOMER3-204ENST00000539827 LINC01553A4QN01 128 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 TPP1O14773 563 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ARHGEF15O94989 841 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ALADP13716 330 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 MYOGP15173 224 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 DNAJC3Q13217 504 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 CCDC117Q8IWD4 279 aaPredicted RBP22.72■■□□□ 1.23
HOMER3-204ENST00000539827 LRRC8CQ8TDW0 803 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ARNT2Q9HBZ2 717 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 H0Y626 953 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 CBX4O00257 560 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ETV4P43268 484 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 SERPINH1P50454 418 aaKnown RBP22.72■■□□□ 1.23
HOMER3-204ENST00000539827 PDE1BQ01064 536 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 FSCBQ5H9T9 825 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 DENND4CQ5VZ89 1909 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 MICALCLQ6ZW33 695 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 CCDC197Q8NCU1 140 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 BHMTQ93088 406 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 TMA16Q96EY4 203 aaKnown RBP22.72■■□□□ 1.23
HOMER3-204ENST00000539827 GCNAQ96QF7 691 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 RBBP8Q99708 897 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 CINPQ9BW66 212 aaPredicted RBP22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ACE2Q9BYF1 805 aaPredicted RBP22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ASAH2Q9NR71 780 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 TLR9Q9NR96 1032 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 CFAP97Q9P2B7 532 aa22.72■■□□□ 1.23
HOMER3-204ENST00000539827 ALDOAP04075 364 aaKnown RBP22.71■■□□□ 1.23
HOMER3-204ENST00000539827 CDC25CP30307 473 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 CLCN4P51793 760 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 PDPK2PQ6A1A2 396 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 BBS5Q8N3I7 341 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 ZNF75CPQ92670 426 aaPredicted RBP22.71■■□□□ 1.23
HOMER3-204ENST00000539827 SMG9Q9H0W8 520 aaKnown RBP22.71■■□□□ 1.23
HOMER3-204ENST00000539827 MRM3Q9HC36 420 aaKnown RBP22.71■■□□□ 1.23
HOMER3-204ENST00000539827 SEPT3Q9UH03 358 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 LSM7Q9UK45 103 aaKnown RBP22.71■■□□□ 1.23
HOMER3-204ENST00000539827 PLLPQ9Y342 182 aa22.71■■□□□ 1.23
HOMER3-204ENST00000539827 TRAV19A0A0A6YYK7 116 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 TOP3BO95985 862 aaKnown RBP22.7■■□□□ 1.23
HOMER3-204ENST00000539827 C1RP00736 705 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 MZF1P28698 734 aaPredicted RBP22.7■■□□□ 1.23
HOMER3-204ENST00000539827 SPRP35270 261 aaPredicted RBP22.7■■□□□ 1.23
HOMER3-204ENST00000539827 IRS1P35568 1242 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 RGRP47804 291 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 SLC7A9P82251 487 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 SIRPB2Q5JXA9 342 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 RNF135Q8IUD6 432 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 HJURPQ8NCD3 748 aaPredicted RBP22.7■■□□□ 1.23
HOMER3-204ENST00000539827 SH3BP1Q9Y3L3 701 aa22.7■■□□□ 1.23
HOMER3-204ENST00000539827 SNAP91O60641 907 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 RFPL2O75678 378 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 VAPBO95292 243 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 DHRS4L1P0CG22 281 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 CCR2P41597 374 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 IFT88Q13099 833 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 CYTH1Q15438 398 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 CNGA3Q16281 694 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 CGB2Q6NT52 195 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 DCLK2Q8N568 766 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 PTCD2Q8WV60 388 aaKnown RBP22.7■■□□□ 1.22
HOMER3-204ENST00000539827 CABS1Q96KC9 395 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 EXOC2Q96KP1 924 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 SLC46A2Q9BY10 475 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 SLCO1B3Q9NPD5 702 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 MKS1Q9NXB0 559 aa22.7■■□□□ 1.22
HOMER3-204ENST00000539827 PRKAG3Q9UGI9 489 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms