RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CNGB3Q9NQW8 809 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 BTBD7Q9P203 1132 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MSRAQ9UJ68 235 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FBXL21Q9UKT6 434 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 A0A087WXM4 84 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 BCLAF3A2AJT9 711 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 H3BQF6 201 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 BIRC5O15392 142 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 OR6A2O95222 327 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 COX7A2P14406 83 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 THOP1P52888 689 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM153CQ494X1 144 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 LIPMQ5VYY2 423 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 RAP1GAP2Q684P5 730 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 DNAAF5Q86Y56 855 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF276Q8N554 614 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PTCD3Q96EY7 689 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 Q96MT0 163 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GEMIN8Q9NWZ8 242 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM50BQ9Y247 325 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 DISP2A7MBM2 1401 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PIGNO95427 931 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ITGA2P17301 1181 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 RAB10P61026 200 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 IFI35P80217 286 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 SULT2A1Q06520 285 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MAP2K5Q13163 448 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PFKFB4Q16877 469 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 NDUFAF6Q330K2 333 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 R3HCC1LQ7Z5L2 792 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GATAD2AQ86YP4 633 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 OR52K1Q8NGK4 314 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PIWIL2Q8TC59 973 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 SNRNP25Q9BV90 132 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MYLK2Q9H1R3 596 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 NEK6Q9HC98 313 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ASTN1O14525 1302 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 SRRM3A6NNA2 597 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FKBP1BP68106 108 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ACSM2AQ08AH3 577 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GRM3Q14832 879 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 USP41Q3LFD5 358 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ACSM2BQ68CK6 577 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 STRADAQ7RTN6 431 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 RD3Q7Z3Z2 195 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HDDC2Q7Z4H3 204 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ILDR1Q86SU0 546 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PROSER1Q86XN7 944 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 POMGNT2Q8NAT1 580 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PPTC7Q8NI37 304 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ELMO1Q92556 727 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ARHGEF3Q9NR81 526 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CHST7Q9NS84 486 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 NUMBP49757 651 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TRAF3Q13114 568 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TTC27Q6P3X3 843 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 SNX32Q86XE0 403 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HAS1Q92839 578 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 KLHL25Q9H0H3 589 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 LHX5Q9H2C1 402 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CLN6Q9NWW5 311 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PHGDHO43175 533 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HDCP19113 662 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 LPOP22079 712 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TTKP33981 857 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PPM1AP35813 382 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GRM5P41594 1212 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 POLD2P49005 469 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PLK1P53350 603 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TAB1Q15750 504 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ARMC4Q5T2S8 1044 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM46CQ5VWP2 391 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 EIF3MQ7L2H7 374 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 VN1R5Q7Z5H4 357 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 COLGALT2Q8IYK4 626 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HJURPQ8NCD3 748 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 KLQ9UEF7 1012 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 VPS4AQ9UN37 437 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TBC1D30Q9Y2I9 924 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MFHAS1Q9Y4C4 1052 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ACSL4O60488 711 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 SMNDC1O75940 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 GPR1P46091 355 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 CASP5P51878 434 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF618Q5T7W0 954 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NEK5Q6P3R8 708 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 C1orf50Q9BV19 199 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NDOR1Q9UHB4 597 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 NR2E3Q9Y5X4 410 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 KIF13AQ9H1H9 1805 aa6.54□□□□□ -1.36
LSAMP-207ENST00000539563 LOC102724159A0A0B4J2E5 919 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms