RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 NXF3Q9H4D5 531 aaKnown RBP20.55■□□□□ 0.88
TMEM260-203ENST00000539559 TRPC7Q9HCX4 862 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 VPS28Q9UK41 221 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 AP4S1Q9Y587 144 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 ARHGEF37A1IGU5 675 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 C9IYK1 514 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 DDHD2O94830 711 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 EMP3P54852 163 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 PAFAH1B3Q15102 231 aaKnown RBP20.55■□□□□ 0.88
TMEM260-203ENST00000539559 C9orf57Q5W0N0 161 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 KCTD11Q693B1 232 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 RNF135Q8IUD6 432 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 HSPBAP1Q96EW2 488 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 TSNARE1Q96NA8 513 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 GPR22Q99680 433 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 TMEM79Q9BSE2 394 aa20.55■□□□□ 0.88
TMEM260-203ENST00000539559 ARHGAP10A1A4S6 786 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 SDHDO14521 159 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 CABYRO75952 493 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 JCHAINP01591 159 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 PLK1P53350 603 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 GJA9P57773 515 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 FKBP1BP68106 108 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 PPIDQ08752 370 aaKnown RBP20.54■□□□□ 0.88
TMEM260-203ENST00000539559 POU6F1Q14863 301 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 RIN3Q8TB24 985 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 STYXQ8WUJ0 223 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 LPGAT1Q92604 370 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 MCMBPQ9BTE3 642 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 SNX25Q9H3E2 840 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 NOL11Q9H8H0 719 aaKnown RBP20.54■□□□□ 0.88
TMEM260-203ENST00000539559 PLK2Q9NYY3 685 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 TRIM38O00635 465 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 GRM5P41594 1212 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 SLC26A2P50443 739 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 NDST2P52849 883 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 ADARP55265 1226 aaKnown RBP20.54■□□□□ 0.88
TMEM260-203ENST00000539559 PRAMEP78395 509 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 IKBKEQ14164 716 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 ARMCX2Q7L311 632 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 TXNDC5Q8NBS9 432 aaKnown RBP20.54■□□□□ 0.88
TMEM260-203ENST00000539559 OR9I1Q8NGQ6 314 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 SLCO4A1Q96BD0 722 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 IL22Q9GZX6 179 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 FAM49AQ9H0Q0 323 aaPredicted RBP20.54■□□□□ 0.88
TMEM260-203ENST00000539559 CDHR5Q9HBB8 845 aa20.54■□□□□ 0.88
TMEM260-203ENST00000539559 PRORSD1PA6NEY8 169 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 NRP1O14786 923 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 FOXD2O60548 495 aaPredicted RBP20.53■□□□□ 0.88
TMEM260-203ENST00000539559 H2AFYO75367 372 aaKnown RBP20.53■□□□□ 0.88
TMEM260-203ENST00000539559 STT3AP46977 705 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 OSBPL2Q9H1P3 480 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 CACNG4Q9UBN1 327 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
TMEM260-203ENST00000539559 TSPAN8P19075 237 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 TPI1P60174 286 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 HERC6Q8IVU3 1022 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 DLG3Q92796 817 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 NPY6RQ99463 290 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 RCOR3Q9P2K3 495 aaPredicted RBP20.53■□□□□ 0.88
TMEM260-203ENST00000539559 SFMBT1Q9UHJ3 866 aa20.53■□□□□ 0.88
TMEM260-203ENST00000539559 TARM1B6A8C7 271 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 FBP2O00757 339 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 AURKAO14965 403 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 TADA2AO75478 443 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 TIPRLO75663 272 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 MT-CYBP00156 380 aaPredicted RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 CSE1LP55060 971 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 AGKQ53H12 422 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 DUS1LQ6P1R4 473 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 KLC3Q6P597 504 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 SETD3Q86TU7 594 aaPredicted RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 CPNE9Q8IYJ1 553 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 LINC01465Q8N7H1 131 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 DIS3LQ8TF46 1054 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 DDI1Q8WTU0 396 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 PPWD1Q96BP3 646 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 SNX27Q96L92 541 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 POMKQ9H5K3 350 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 SLC2A6Q9UGQ3 507 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 BCAP29Q9UHQ4 241 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 KCNA5P22460 613 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 HOXA11P31270 313 aaPredicted RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 POU5F1BQ06416 359 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 TRIM25Q14258 630 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 ZNF792Q3KQV3 632 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 USP41Q3LFD5 358 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 FBXO47Q5MNV8 452 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 HMBOX1Q6NT76 420 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 LPCAT2Q7L5N7 544 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 ANKRD23Q86SG2 305 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 UNC93AQ86WB7 457 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 OSTM1Q86WC4 334 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 BRI3BPQ8WY22 251 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 RSL24D1Q9UHA3 163 aaKnown RBP20.52■□□□□ 0.88
TMEM260-203ENST00000539559 ACOT9Q9Y305 439 aa20.52■□□□□ 0.88
TMEM260-203ENST00000539559 TMX2-CTNND1H3BSU7 103 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 RECQL4O94761 1208 aa20.51■□□□□ 0.87
TMEM260-203ENST00000539559 UGT1A6P19224 532 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms