RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 EIF2B4Q9UI10 523 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 CDV3Q9UKY7 258 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 SLC6A14Q9UN76 642 aa9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 MFHAS1Q9Y4C4 1052 aa9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 PCDHA13Q9Y5I0 950 aa9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 EPN1Q9Y6I3 576 aaPredicted RBP9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 SLCO1B1Q9Y6L6 691 aa9.13□□□□□ -0.95
LRTOMT-216ENST00000539271 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 DFFAO00273 331 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 CDX4O14627 284 aaPredicted RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 BCAT2O15382 392 aaPredicted RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 LATO43561 262 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 NDUFA10O95299 355 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 POP4O95707 220 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 IGSF6O95976 241 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ENGP17813 658 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ITGB7P26010 798 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 GKP32189 559 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 GJC1P36383 396 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 HADHBP55084 474 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 TAS2R38P59533 333 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 RHOAP61586 193 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PPP2CBP62714 309 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PPP2CAP67775 309 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 IL10RBQ08334 325 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PUM1Q14671 1186 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PDK2Q15119 407 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 SPA17Q15506 151 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 MYLK3Q32MK0 819 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ATXN7L2Q5T6C5 722 aaPredicted RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ARHGAP36Q6ZRI8 547 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ERN2Q76MJ5 926 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 RYBPQ8N488 228 aaPredicted RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 KCTD6Q8NC69 237 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 OR6K2Q8NGY2 324 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PPP1R16AQ96I34 528 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 GDAP1L1Q96MZ0 367 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ZNF670Q9BS34 389 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 RTKNQ9BST9 563 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 ZDHHC6Q9H6R6 413 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 SP110Q9HB58 689 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 PREBQ9HCU5 417 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 LUC7LQ9NQ29 371 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 TMEM9BQ9NQ34 198 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 DYRK4Q9NR20 520 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 IMPACTQ9P2X3 320 aa9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 IPO11Q9UI26 975 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3DA0A087WVF3 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3IA0A087WXS9 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3EA0A087X179 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3KA0A087X1G2 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 A0A0A6YYK5 440 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 A0A1W2PPC4 97 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 MED19A0JLT2 244 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3FA6NER0 549 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 C4orf47A7E2U8 309 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3LB9A6J9 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 KRIT1O00522 736 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 ARHGAP33O14559 1287 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 SYPP08247 313 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3HP0C7X1 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 SERPINB6P35237 376 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 SLC1A1P43005 524 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 AFF3P51826 1226 aaKnown RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 NEK3P51956 506 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 RAD51Q06609 339 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 RFTN1Q14699 578 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 ANKRD20A8PQ5CZ79 823 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 ZNF805Q5CZA5 627 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 LRRC38Q5VT99 294 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3GQ6DHY5 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3CQ6IPX1 549 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 NEK5Q6P3R8 708 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 RAD9BQ6WBX8 426 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 PARS2Q7L3T8 475 aaKnown RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 ERMP1Q7Z2K6 904 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TRIM69Q86WT6 500 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TMEM139Q8IV31 216 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TBC1D3Q8IZP1 549 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 SPC24Q8NBT2 197 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 PCDH19Q8TAB3 1148 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 RAPGEF5Q92565 580 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 RNF25Q96BH1 459 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 ZNF599Q96NL3 588 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 BAG1Q99933 345 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 CALN1Q9BXU9 219 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 CPEB1Q9BZB8 566 aaKnown RBP9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 EBF2Q9HAK2 575 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TM9SF3Q9HD45 589 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 FSCN3Q9NQT6 498 aa9.11□□□□□ -0.95
LRTOMT-216ENST00000539271 TFR2Q9UP52 801 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms