RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SORCS1Q8WY21 1168 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 CPT1BQ92523 772 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 HERC2P3Q9BVR0 1158 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 HERC5Q9UII4 1024 aaKnown RBP5.3□□□□□ -1.56
CCDC7-209ENST00000539197 KCND3Q9UK17 655 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 DHDHQ9UQ10 334 aa5.3□□□□□ -1.56
CCDC7-209ENST00000539197 A0A096LPK6 155 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 CHL1O00533 1208 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 CH25HO95992 272 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 NBPF7P0C2Y1 421 aaPredicted RBP5.29□□□□□ -1.56
CCDC7-209ENST00000539197 ANOS1P23352 680 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 DGKAP23743 735 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 SERPINA4P29622 427 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 RPL3P39023 403 aaKnown RBP5.29□□□□□ -1.56
CCDC7-209ENST00000539197 GPR12P47775 334 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 GLIPR1P48060 266 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 SLC44A2Q8IWA5 706 aaPredicted RBP5.29□□□□□ -1.56
CCDC7-209ENST00000539197 RFWD2Q8NHY2 731 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 CD101Q93033 1021 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
CCDC7-209ENST00000539197 MVB12BQ9H7P6 319 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 PRDM8Q9NQV8 689 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 C19orf53Q9UNZ5 99 aaPredicted RBP5.29□□□□□ -1.56
CCDC7-209ENST00000539197 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
CCDC7-209ENST00000539197 GOLGA6L3A6NEY3 463 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 CBX6O95503 412 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 ITGA2BP08514 1039 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 GM2AP17900 193 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 FMO4P31512 558 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 TECP42680 631 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 PTPN9P43378 593 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 GALNT1Q10472 559 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 HLTFQ14527 1009 aaKnown RBP eCLIP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 CCDC6Q16204 474 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 UNQ6126/PRO20091Q6UXV3 157 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 SECTM1Q8WVN6 248 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 C3orf49Q96BT1 292 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 ZNF385AQ96PM9 386 aaKnown RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 DDX23Q9BUQ8 820 aaKnown RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 EVA1AQ9H8M9 152 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 METTL14Q9HCE5 456 aaKnown RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 WDR6Q9NNW5 1121 aaKnown RBP5.28□□□□□ -1.56
CCDC7-209ENST00000539197 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
CCDC7-209ENST00000539197 FAM90A20PA6NIJ5 464 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 STRNO43815 780 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 GNALP38405 381 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 CRIP2P52943 208 aaPredicted RBP5.27□□□□□ -1.57
CCDC7-209ENST00000539197 AP2B1P63010 937 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 ST3GAL1Q11201 340 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 PFKFB4Q16877 469 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 DCAF6Q58WW2 860 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 GALNT15Q8N3T1 639 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 PTGR2Q8N8N7 351 aaPredicted RBP5.27□□□□□ -1.57
CCDC7-209ENST00000539197 EID2BQ96D98 161 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 PGLYRP2Q96PD5 576 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 UBTD1Q9HAC8 227 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 THAP1Q9NVV9 213 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 GRHL1Q9NZI5 618 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 NDUFAF4Q9P032 175 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 PAM16Q9Y3D7 125 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 ADAM18Q9Y3Q7 739 aa5.27□□□□□ -1.57
CCDC7-209ENST00000539197 FFAR2O15552 330 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 TROAPQ12815 778 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 CAPSQ13938 189 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 RBBP5Q15291 538 aaKnown RBP5.26□□□□□ -1.57
CCDC7-209ENST00000539197 CALCRLQ16602 461 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 AP5B1Q2VPB7 878 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 KRT71Q3SY84 523 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 XRRA1Q6P2D8 792 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 KLHL24Q6TFL4 600 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 GDPD4Q6W3E5 623 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 TUBA1AQ71U36 451 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 MAB21L3Q8N8X9 362 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 IL17RCQ8NAC3 791 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 OR4N2Q8NGD1 307 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 MTBPQ96DY7 904 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 TUBA1CQ9BQE3 449 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 MMP28Q9H239 520 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 TLR8Q9NR97 1041 aaKnown RBP5.26□□□□□ -1.57
CCDC7-209ENST00000539197 TMLHEQ9NVH6 421 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 HDAC6Q9UBN7 1215 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 FBXO40Q9UH90 709 aa5.26□□□□□ -1.57
CCDC7-209ENST00000539197 CFC1BP0CG36 223 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 CFC1P0CG37 223 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 PDIA3P30101 505 aaKnown RBP5.25□□□□□ -1.57
CCDC7-209ENST00000539197 BTKQ06187 659 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 DMP1Q13316 513 aaPredicted RBP5.25□□□□□ -1.57
CCDC7-209ENST00000539197 STT3BQ8TCJ2 826 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 FEM1CQ96JP0 617 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 OR1F2PQ96R84 312 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 CHST12Q9NRB3 414 aa5.25□□□□□ -1.57
CCDC7-209ENST00000539197 IGHV4OR15-8A0A075B7B6 117 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms