RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RSRC2Q7L4I2 434 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 GET4Q7L5D6 327 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 GRASPQ7Z6J2 395 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 DNAJB7Q7Z6W7 309 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 TTC30AQ86WT1 665 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ERICH1Q86X53 443 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ADGRG2Q8IZP9 1017 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 NUP93Q8N1F7 819 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ARHGAP18Q8N392 663 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 LINC01356Q8N9X3 169 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 C1orf131Q8NDD1 294 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 STKLD1Q8NE28 680 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 MNS1Q8NEH6 495 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 SLC20A1Q8WUM9 679 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ING5Q8WYH8 240 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 MRPS31Q92665 395 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 MSLNLQ96KJ4 702 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ZSWIM3Q96MP5 696 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 SMOQ99835 787 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ZSWIM1Q9BR11 485 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ORAI3Q9BRQ5 295 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.49□□□□□ -1.694e-59■■■□□ 16.1
SNHG1-208ENST00000538266 TRIM62Q9BVG3 475 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 NACA2Q9H009 215 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 TSPYL1Q9H0U9 437 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 LHX5Q9H2C1 402 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 HAUS4Q9H6D7 363 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 CSNK1G1Q9HCP0 422 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 TMEM30AQ9NV96 361 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 HCFC1R1Q9NWW0 138 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 COMMD8Q9NX08 183 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 TRMT1Q9NXH9 659 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 ARHGAP20Q9P2F6 1191 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 THEGQ9P2T0 379 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 NOCTQ9UK39 431 aaKnown RBP4.49□□□□□ -1.69
SNHG1-208ENST00000538266 MAPRE3Q9UPY8 281 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 NR2E1Q9Y466 385 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 B3GALT1Q9Y5Z6 326 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 PATJQ8NI35 1801 aa4.49□□□□□ -1.69
SNHG1-208ENST00000538266 NCANO14594 1321 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 MYO16Q9Y6X6 1858 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 A0A1B0GTL3 188 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 HHLA1C9JL84 531 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 E5RJQ4 531 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DDX3XO00571 662 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DVL2O14641 736 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ZSCAN12O43309 604 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ATP8B1O43520 1251 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 AKR1B10O60218 316 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CYP7B1O75881 506 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ZBED1O96006 694 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CALB1P05937 261 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 RALAP11233 206 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DESP17661 470 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SP100P23497 879 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 GABRR2P28476 465 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 HNRNPH3P31942 346 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 AVPR1AP37288 418 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 PRKCIP41743 596 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TUBP50607 506 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 KIF11P52732 1056 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 MRPS5P82675 430 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 FMO1Q01740 532 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TFF2Q03403 129 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 GOLGA8FQ08AF8 430 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 GOLGA8DPQ0D2H9 430 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TAF10Q12962 218 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SPA17Q15506 151 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TEAD2Q15562 447 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 LEXMQ3ZCV2 418 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 PMF1Q6P1K2 205 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TMCO3Q6UWJ1 677 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SYT10Q6XYQ8 523 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 MMS22LQ6ZRQ5 1243 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 GPRIN1Q7Z2K8 1008 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 IRF2BP2Q7Z5L9 587 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TADA2BQ86TJ2 420 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 MON1AQ86VX9 555 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 C1QL4Q86Z23 238 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ZDHHC17Q8IUH5 632 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 DTX3Q8N9I9 347 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TDRD5Q8NAT2 981 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ZMIZ2Q8NF64 920 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SCAMP5Q8TAC9 235 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SLC30A5Q8TAD4 765 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 SLC35F5Q8WV83 523 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 OVCA2Q8WZ82 227 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 FAM149B1Q96BN6 582 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF707Q96C28 371 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 C18orf8Q96DM3 657 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 HSFY1Q96LI6 401 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CCDC42Q96M95 316 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 PANX2Q96RD6 677 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CPXM1Q96SM3 734 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 CDK5RAP1Q96SZ6 601 aaKnown RBP4.48□□□□□ -1.69
SNHG1-208ENST00000538266 AGPAT1Q99943 283 aa4.48□□□□□ -1.69
SNHG1-208ENST00000538266 TTLL2Q9BWV7 592 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms