RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 STN1Q9H668 368 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 NMUR1Q9HB89 426 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 USP29Q9HBJ7 922 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 COX16Q9P0S2 106 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 NCDNQ9UBB6 729 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 EVLQ9UI08 416 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CA14Q9ULX7 337 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 NDRG2Q9UN36 371 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PCDHGC5Q9Y5F6 944 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TRIOBPQ9H2D6 2365 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 COL4A4P53420 1690 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 MEI4A8MW99 385 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CFAP99D6REC4 459 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RASA4O43374 803 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 AP1G1O43747 822 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SOAT2O75908 522 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SERPINF2P08697 491 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ALPPL2P10696 532 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FCARP24071 287 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MAPK9P45984 424 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GALK1P51570 392 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NEK3P51956 506 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 DLX2Q07687 328 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BCL2L1Q07817 233 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SGCGQ13326 291 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PAFAH1B3Q15102 231 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CNGA3Q16281 694 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ACCSLQ4AC99 568 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 LYPLAL1Q5VWZ2 237 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FBXW10Q5XX13 1052 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PDPK2PQ6A1A2 396 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CAPRIN2Q6IMN6 1127 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FBXL22Q6P050 247 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RHBDF2Q6PJF5 856 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BBS12Q6ZW61 710 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TAOK1Q7L7X3 1001 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 MAATS1Q7Z4T9 603 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CCNJLQ8IV13 435 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 C1orf210Q8IVY1 113 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 C7orf57Q8NEG2 295 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TNIP2Q8NFZ5 429 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 WDR48Q8TAF3 677 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 KLC2Q9H0B6 622 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BTBD1Q9H0C5 482 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HSD3B7Q9H2F3 369 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CRISPLD1Q9H336 500 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 EBF3Q9H4W6 596 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 VPS37BQ9H9H4 285 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SPTLC3Q9NUV7 552 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PAK5Q9P286 719 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HS3ST2Q9Y278 367 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PCDHA3Q9Y5H8 950 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 E7EVH7 732 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TMX2-CTNND1H3BSU7 103 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 H7C0C1 242 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 APOC4-APOC2K7ER74 178 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NEMP1O14524 444 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 INMTO95050 263 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PRAMEF12O95522 483 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 KLF8O95600 359 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 EPOP01588 193 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 APOC2P02655 101 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RALBP11234 206 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 VCLP18206 1134 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PAMP19021 973 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 HLA-DPA1P20036 260 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FUT4P22083 530 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TEAD1P28347 426 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 CTNNA1P35221 906 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ATP5OP48047 213 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 POLD2P49005 469 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 DUSP3P51452 185 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 KCNQ1P51787 676 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NEK2P51955 445 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 BNIP1Q12981 228 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NAA30Q147X3 362 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ASTE1Q2TB18 679 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PPP6R3Q5H9R7 873 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 AARS2Q5JTZ9 985 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NAPEPLDQ6IQ20 393 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ARHGEF18Q6ZSZ5 1173 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TPGS1Q6ZTW0 290 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 KIAA0907Q7Z7F0 614 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 IQCHQ86VS3 1027 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ETFBKMTQ8IXQ9 262 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 SLC15A3Q8IY34 581 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TTC9BQ8N6N2 239 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 GBP7Q8N8V2 638 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 OR6C4Q8NGE1 309 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 OR2T34Q8NGX1 318 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TPCN2Q8NHX9 752 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 FAM71BQ8TC56 605 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 TFB1MQ8WVM0 346 aaKnown RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 RUBCNQ92622 972 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 IFT43Q96FT9 208 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 PCDHB18PQ96TA0 734 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NAPGQ99747 312 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-211ENST00000538253 ZSWIM1Q9BR11 485 aa3.63□□□□□ -1.83
PTPN22-211ENST00000538253 NAT9Q9BTE0 207 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms