RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IFT43Q96FT9 208 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 ZNF512Q96ME7 567 aaPredicted RBP8.82□□□□□ -1
UBE3B-208ENST00000538070 LENG8Q96PV6 779 aaPredicted RBP8.82□□□□□ -1
UBE3B-208ENST00000538070 PANX3Q96QZ0 392 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 CCSER2Q9H7U1 834 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 IL1RL2Q9HB29 575 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 DLGAP2Q9P1A6 1054 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 UXTQ9UBK9 157 aaPredicted RBP8.82□□□□□ -1
UBE3B-208ENST00000538070 FBXO5Q9UKT4 447 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 SOX13Q9UN79 622 aa8.82□□□□□ -1
UBE3B-208ENST00000538070 TOMM70O94826 608 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PRSS56P0CW18 603 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 CCDC166P0CW27 439 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 CYBAP13498 195 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PCID2Q5JVF3 399 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 LPCAT4Q643R3 524 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PKN3Q6P5Z2 889 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 TMEM154Q6P9G4 183 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 FRMD7Q6ZUT3 714 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 TMEM135Q86UB9 458 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZC3HC1Q86WB0 502 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 KLHDC9Q8NEP7 349 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 MAGEC3Q8TD91 643 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 GPAMQ9HCL2 828 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 EIF2B3Q9NR50 452 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 NDE1Q9NXR1 346 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 MARCH2Q9P0N8 246 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZDHHC2Q9UIJ5 367 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 LNPEPQ9UIQ6 1025 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PPM1HQ9ULR3 514 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SSX2IPQ9Y2D8 614 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 CDY1Q9Y6F8 540 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 LRRC37A2A6NM11 1700 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 STX16-NPEPL1H3BU86 382 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 KLF11O14901 512 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZBTB14O43829 449 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 MAFKO60675 156 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SP100P23497 879 aaPredicted RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 GRK2P25098 689 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PMLP29590 882 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 VHLP40337 213 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 RPL34P49207 117 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 KCNQ1P51787 676 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 GEMP55040 296 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 CCL23P55773 120 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SLC34A1Q06495 639 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 TBL3Q12788 808 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 SEMA3BQ13214 749 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZNF235Q14590 738 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 RAB41Q5JT25 222 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 PIK3R6Q5UE93 754 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SEL1L3Q68CR1 1132 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 IZUMO2Q6UXV1 221 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 LINC00523Q86TU6 105 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 PIM3Q86V86 326 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ARHGAP12Q8IWW6 846 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 NRG4Q8WWG1 115 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZCWPW1Q9H0M4 648 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 POMKQ9H5K3 350 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ALG9Q9H6U8 611 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 TBC1D13Q9NVG8 400 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ADA2Q9NZK5 511 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 GPC4O75487 556 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 KLHL2O95198 593 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SCNN1BP51168 640 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 NSUN2Q08J23 767 aaKnown RBP eCLIP8.81□□□□□ -1
UBE3B-208ENST00000538070 CCDC153Q494R4 210 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 MMEL1Q495T6 779 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 RNF180Q86T96 592 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 RTN4RL1Q86UN2 441 aaPredicted RBP8.81□□□□□ -1
UBE3B-208ENST00000538070 NUP93Q8N1F7 819 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ACMSDQ8TDX5 336 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 HEXDCQ8WVB3 486 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 IGSF8Q969P0 613 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 SEMA3CQ99985 751 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 CCDC106Q9BWC9 280 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 GPR62Q9BZJ7 368 aa8.81□□□□□ -1
UBE3B-208ENST00000538070 ZNF487B1APH4 448 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 SUPT7LO94864 414 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 CD151P48509 253 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 ART3Q13508 389 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 KRT72Q14CN4 511 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 POLD3Q15054 466 aaPredicted RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 MAPRE1Q15691 268 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 CLLU1OSQ5K130 101 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 KIAA1841Q6NSI8 718 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 TIFABQ6ZNK6 161 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 DCP1BQ8IZD4 617 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 LGI2Q8N0V4 545 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 PCDH20Q8N6Y1 951 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 DBF4BQ8NFT6 615 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 TBATAQ96M53 351 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 CDH19Q9H159 772 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 FAM50BQ9Y247 325 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 GOLGA4Q13439 2230 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 DICER1Q9UPY3 1922 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 A8MX80 341 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms