RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 MRPL9Q9BYD2 267 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SEMA6AQ9H2E6 1030 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SPG21Q9NZD8 308 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CORO2BQ9UQ03 480 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 GMPPBQ9Y5P6 360 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 LTA4HP09960 611 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 EIF4BP23588 611 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CLK3P49761 638 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ZCCHC23Q6ZST2 131 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 BTN2A1Q7KYR7 527 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 BHLHE22Q8NFJ8 381 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 KAT5Q92993 513 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 BTBD9Q96Q07 612 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CHID1Q9BWS9 393 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ATXN3LQ9H3M9 355 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 RNPEPL1Q9HAU8 725 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ING4Q9UNL4 249 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 GSAPA4D1B5 854 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 KPNA5O15131 536 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TMCC2O75069 709 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 AXLP30530 894 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 MMP14P50281 582 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ARHGDIBP52566 201 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 FBXL19Q6PCT2 694 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CXXC5Q7LFL8 322 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 PCDH20Q8N6Y1 951 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 BPIFB6Q8NFQ5 453 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 PPP3R2Q96LZ3 170 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 C2orf49Q9BVC5 232 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 EPB41L1Q9H4G0 881 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TMX2Q9Y320 296 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TIMM13Q9Y5L4 95 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SNAP91O60641 907 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 HMGCRP04035 888 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 HOXC6P09630 235 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 INSRRP14616 1297 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MAPK8P45983 427 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 CHN2P52757 468 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 PRKAG1P54619 331 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 NR1H2P55055 460 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MAPKAPK3Q16644 382 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 CES3Q6UWW8 571 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ABRAXAS1Q6UWZ7 409 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 STX12Q86Y82 276 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SUSD6Q92537 303 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 AGO4Q9HCK5 861 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 RAB21Q9UL25 225 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SLIT2O94813 1529 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MIPP30301 263 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ALDH5A1P51649 535 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 IFI35P80217 286 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 PCID2Q5JVF3 399 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 EIF1ADQ8N9N8 165 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 POC5Q8NA72 575 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ELMO1Q92556 727 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 AP3S1Q92572 193 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ZKSCAN4Q969J2 545 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ANKZF1Q9H8Y5 726 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 POPDC2Q9HBU9 364 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 DNPEPQ9ULA0 475 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SLC9A8Q9Y2E8 581 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 STX16-NPEPL1H3BU86 382 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 STX16O14662 325 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MLYCDO95822 493 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SERPINA1P01009 418 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SNRPB2P08579 225 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ATP5F1P24539 256 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ACAT1P24752 427 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 STARP49675 285 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 NAGLUP54802 743 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ARF5P84085 180 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 RALGDSQ12967 914 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 FAM171A1Q5VUB5 890 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 BRSK2Q8IWQ3 736 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 TSPAN14Q8NG11 270 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 WDR60Q8WVS4 1066 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 PPP1R16AQ96I34 528 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SENP6Q9GZR1 1112 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 NUDT5Q9UKK9 219 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 IKZF3Q9UKT9 509 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 RBM7Q9Y580 266 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ACKR2O00590 384 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SH3BGRLO75368 114 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 CSDE1O75534 798 aaKnown RBP10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MICAL2O94851 1124 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 MYL9P24844 172 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 KLRC2P26717 231 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 ACLYP53396 1101 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 DPYSL3Q14195 570 aa10.74□□□□□ -0.69
CLIP1-209ENST00000537178 SQLEQ14534 574 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms