RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 RFX8Q6ZV50 586 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 ATP11CQ8NB49 1132 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 WDR83Q9BRX9 315 aaKnown RBP12.17□□□□□ -0.46
CLIP1-208ENST00000537004 EURLQ9NYK6 297 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 DEC1Q9P2X7 70 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 TBK1Q9UHD2 729 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 HCN2Q9UL51 889 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 SLC8A2Q9UPR5 921 aa12.17□□□□□ -0.46
CLIP1-208ENST00000537004 I6L893 689 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 EEF2KO00418 725 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 MFSD11O43934 449 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TSPAN3O60637 253 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 LILRB5O75023 590 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 GCATO75600 419 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 PAPSS2O95340 614 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 F9P00740 461 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 APODP05090 189 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 HNRNPLP14866 589 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CHN1P15882 459 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 GCAP28676 217 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 EIF2DP41214 584 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 GRIA2P42262 883 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 KIR2DL1P43626 348 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 SEC24CP53992 1094 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 GPX6P59796 221 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 DPYSQ14117 519 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 PPP1R21Q6ZMI0 780 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 BZW1Q7L1Q6 419 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 RIBC1Q8N443 379 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 IL17RCQ8NAC3 791 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TXNDC5Q8NBS9 432 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CENPTQ96BT3 561 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 KLC2Q9H0B6 622 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 PPANQ9NQ55 473 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 ANLNQ9NQW6 1124 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 OLA1Q9NTK5 396 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FOXO6A8MYZ6 492 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 HACD1B0YJ81 288 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAM72CH0Y354 149 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 NDUFAB1O14561 156 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CACNG3O60359 315 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 ATG13O75143 517 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CXCR3P49682 368 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 ARL13BQ3SXY8 428 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAXCQ5TGI0 409 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAM72AQ5TYM5 149 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FYB2Q5VWT5 728 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAM72DQ6L9T8 149 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAM72BQ86X60 149 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TERB1Q8NA31 727 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 DQX1Q8TE96 717 aaKnown RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 TRIM62Q9BVG3 475 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
CLIP1-208ENST00000537004 ETNK1Q9HBU6 452 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 MARK1Q9P0L2 795 aa12.16□□□□□ -0.46
CLIP1-208ENST00000537004 CEP250Q9BV73 2442 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 GOLGA6L7A0A1B0GV03 622 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 C5orf60A6NFR6 353 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 POC1B-GALNT4F8VUJ3 575 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 KLF8O95600 359 aaPredicted RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 APRTP07741 180 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 CREB1P16220 341 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 SSTR1P30872 391 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 PHBP35232 272 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 WASP42768 502 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 MAGEA6P43360 314 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 HARS2P49590 506 aaKnown RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 SGSHP51688 502 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 PAFAH1B3Q15102 231 aaKnown RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 TMED2Q15363 201 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 SYT13Q7L8C5 426 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 TAC4Q86UU9 113 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 NLRP14Q86W24 1093 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 PALM2Q8IXS6 379 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 HTR3CQ8WXA8 447 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 XPO6Q96QU8 1125 aaKnown RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 ACOX2Q99424 681 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 LGMNQ99538 433 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 FRMD8Q9BZ67 464 aaPredicted RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 WDCPQ9H6R7 721 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
CLIP1-208ENST00000537004 NYNRINQ9P2P1 1898 aaKnown RBP12.15□□□□□ -0.46
CLIP1-208ENST00000537004 GMNCA6NCL1 334 aa12.15□□□□□ -0.47
CLIP1-208ENST00000537004 DCLK1O15075 740 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms