RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ZFP69BQ9UJL9 534 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HAO1Q9UJM8 370 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MTO1Q9Y2Z2 717 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GREM1O60565 184 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TARSP26639 723 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HOXC13P31276 330 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 IRX1P78414 480 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MTM1Q13496 603 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SEMA5AQ13591 1074 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ZNF534Q76KX8 674 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TRIM42Q8IWZ5 723 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 OLFM3Q96PB7 478 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 QKIQ96PU8 341 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 LGMNQ99538 433 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 EBNA1BP2Q99848 306 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TRAV19A0A0A6YYK7 116 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HACD1B0YJ81 288 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HGSO14964 777 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ACSL4O60488 711 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.32e-22■□□□□ 9.5
CDK5RAP3-202ENST00000536708 TACR2P21452 398 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SERPINB4P48594 390 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 COG7P83436 770 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CDK16Q00536 496 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CDK18Q07002 472 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 WASHC2DQ5SRD0 308 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TIFABQ6ZNK6 161 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CFAP61Q8NHU2 1237 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CFAP36Q96G28 342 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RPRD1AQ96P16 312 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 FAM111AQ96PZ2 611 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 XAB2Q9HCS7 855 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CFAP97Q9P2B7 532 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PLLPQ9Y342 182 aa13.16□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TRIM49D1C9J1S8 452 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 COPEO14579 308 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TSPAN3O60637 253 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RFPL1O75677 317 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 METTL18O95568 372 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 C1RP00736 705 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 APRTP07741 180 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MLNP12872 115 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 VAV1P15498 845 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 HCAR3P49019 387 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SERPINB9P50453 376 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ARFIP2P53365 341 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 ADGRE1Q14246 886 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PAFAH1B3Q15102 231 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 MTDHQ86UE4 582 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 PPM1NQ8N819 430 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 BHMTQ93088 406 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SKA1Q96BD8 255 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SRPK1Q96SB4 655 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 CEP41Q9BYV8 373 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 SMYD2Q9NRG4 433 aa13.15□□□□□ -0.3
CDK5RAP3-202ENST00000536708 TBX10O75333 385 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 KRT38O76015 456 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CBX6O95503 412 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SLC7A9P82251 487 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 KRT72Q14CN4 511 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 DBN1Q16643 649 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 STEAP4Q687X5 459 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms