RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 DHX34Q14147 1143 aaKnown RBP4.74□□□□□ -1.65
VBP1-203ENST00000535916 SETMARQ53H47 684 aaPredicted RBP4.74□□□□□ -1.65
VBP1-203ENST00000535916 C9orf139Q6ZV77 190 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 EXOC3L1Q86VI1 746 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 DCUN1D3Q8IWE4 304 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 PTGR2Q8N8N7 351 aaPredicted RBP4.74□□□□□ -1.65
VBP1-203ENST00000535916 NEK9Q8TD19 979 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 SORCS1Q8WY21 1168 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 SCMH1Q96GD3 660 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 CXorf56Q9H5V9 222 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 TMEM51Q9NW97 253 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 NDUFAF4Q9P032 175 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 HERC5Q9UII4 1024 aaKnown RBP4.74□□□□□ -1.65
VBP1-203ENST00000535916 KCND3Q9UK17 655 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
VBP1-203ENST00000535916 CHL1O00533 1208 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 CBX6O95503 412 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 YWHAQP27348 245 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 NCAPH2Q6IBW4 605 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 LIN54Q6MZP7 749 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 FAM186BQ8IYM0 893 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 TBC1D22AQ8WUA7 517 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 WBP2Q969T9 261 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 MVB12BQ9H7P6 319 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 WDR6Q9NNW5 1121 aaKnown RBP4.73□□□□□ -1.65
VBP1-203ENST00000535916 THAP1Q9NVV9 213 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 GRHL1Q9NZI5 618 aa4.73□□□□□ -1.65
VBP1-203ENST00000535916 A0A096LPK6 155 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 FAM90A20PA6NIJ5 464 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 STRNO43815 780 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 KIF1CO43896 1103 aaKnown RBP4.72□□□□□ -1.65
VBP1-203ENST00000535916 TFRCP02786 760 aaKnown RBP4.72□□□□□ -1.65
VBP1-203ENST00000535916 FMO4P31512 558 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 GPR12P47775 334 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 BTKQ06187 659 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 PFKFB4Q16877 469 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 CEP85LQ5SZL2 805 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 RRAGAQ7L523 313 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 RASGRP2Q7LDG7 609 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 ANKRD44Q8N8A2 993 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 ZNF527Q8NB42 609 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 OR4N2Q8NGD1 307 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 HERC2P3Q9BVR0 1158 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 ARFGAP3Q9NP61 516 aa4.72□□□□□ -1.65
VBP1-203ENST00000535916 J3KR12 359 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 SYT5O00445 386 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 PAK4O96013 591 aaPredicted RBP4.71□□□□□ -1.66
VBP1-203ENST00000535916 DGKAP23743 735 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 PDIA3P30101 505 aaKnown RBP4.71□□□□□ -1.66
VBP1-203ENST00000535916 SSTR2P30874 369 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 GLIPR1P48060 266 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 GALNT1Q10472 559 aaPredicted RBP4.71□□□□□ -1.66
VBP1-203ENST00000535916 GALNT15Q8N3T1 639 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 CD101Q93033 1021 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 CHST12Q9NRB3 414 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 TMLHEQ9NVH6 421 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 NLKQ9UBE8 527 aa4.71□□□□□ -1.66
VBP1-203ENST00000535916 A0A087WV62 115 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 OR6C68A6NDL8 312 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 FAM157AC9JC47 383 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 PTPN9P43378 593 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 MTNR1AP48039 350 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 CXCR3P49682 368 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 MVDP53602 400 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 FAM27E3Q08E93 113 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 ST3GAL1Q11201 340 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 LPIN1Q14693 890 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 AP5B1Q2VPB7 878 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 SULT6B1Q6IMI4 303 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 ADAM5Q6NVV9 412 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 XRRA1Q6P2D8 792 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 UNQ6126/PRO20091Q6UXV3 157 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 RINLQ6ZS11 566 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 CCDC117Q8IWD4 279 aaPredicted RBP4.7□□□□□ -1.66
VBP1-203ENST00000535916 AADATQ8N5Z0 425 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 RASSF8Q8NHQ8 419 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 STT3BQ8TCJ2 826 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 UHRF2Q96PU4 802 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 TRAPPC9Q96Q05 1148 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 DDX23Q9BUQ8 820 aaKnown RBP4.7□□□□□ -1.66
VBP1-203ENST00000535916 EVA1AQ9H8M9 152 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 FBXO40Q9UH90 709 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 ADAM18Q9Y3Q7 739 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 PCDHAC2Q9Y5I4 1007 aa4.7□□□□□ -1.66
VBP1-203ENST00000535916 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 SKAP2O75563 359 aaPredicted RBP4.69□□□□□ -1.66
VBP1-203ENST00000535916 CSF1P09603 554 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 IGHV4-30-4P0DP06 118 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 SERPINF1P36955 418 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 CAPSQ13938 189 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 IL13RA2Q14627 380 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 RBBP5Q15291 538 aaKnown RBP4.69□□□□□ -1.66
VBP1-203ENST00000535916 FAM69BQ5VUD6 431 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 PMS2CLQ68D20 193 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 HIST2H2BCQ6DN03 193 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 TUBA1AQ71U36 451 aa4.69□□□□□ -1.66
VBP1-203ENST00000535916 FSIP1Q8NA03 581 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms