RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 POLMQ9NP87 494 aaPredicted RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 DDX56Q9NY93 547 aaKnown RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 PI4KAP42356 2102 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 ARHGAP42A6NI28 874 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 KRT86O43790 486 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 CST8O60676 142 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 CR2P20023 1033 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 TPMTP51580 245 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 IL10RBQ08334 325 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 STARD3Q14849 445 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 CST6Q15828 149 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 ACCSLQ4AC99 568 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 KBTBD6Q86V97 674 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 MAML1Q92585 1016 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 TSGA10Q9BZW7 698 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 ARRDC1-AS1Q9H2J1 176 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHFR-210ENST00000535527 UBA2Q9UBT2 640 aaPredicted RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 AMFRQ9UKV5 643 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 PPM1HQ9ULR3 514 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 R3HDM2Q9Y2K5 976 aaKnown RBP13.31□□□□□ -0.28
CHFR-210ENST00000535527 PCDHGA5Q9Y5G8 931 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 LAMA1P25391 3075 aa13.31□□□□□ -0.28
CHFR-210ENST00000535527 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 A0A1W2PP55 124 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 APOL1O14791 398 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 MCF2LO15068 1137 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 EPN2O95208 641 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 PIGNO95427 931 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 IGLV3-19P01714 112 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 ACSL1P33121 698 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 PTPN7P35236 360 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 CLCN6P51797 869 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 TAS2R38P59533 333 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 MAXP61244 160 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 KLF1Q13351 362 aaPredicted RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 TFDP3Q5H9I0 405 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 ZNF776Q68DI1 518 aaPredicted RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 SDE2Q6IQ49 451 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 RETSATQ6NUM9 610 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 ATPAF2Q8N5M1 289 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 LZTR1Q8N653 840 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 DEFB119Q8N690 84 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 PCDH20Q8N6Y1 951 aaKnown RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 HDAC11Q96DB2 347 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 SIPA1Q96FS4 1042 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 CEP44Q9C0F1 390 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 SP110Q9HB58 689 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 EVLQ9UI08 416 aaPredicted RBP13.3□□□□□ -0.28
CHFR-210ENST00000535527 HEY1Q9Y5J3 304 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 TRPM6Q9BX84 2022 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
CHFR-210ENST00000535527 ZFYVE26Q68DK2 2539 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 CXorf51AA0A1B0GTR3 108 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 LEFTY1O75610 366 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 RPP40O75818 363 aaKnown RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHFR-210ENST00000535527 GSRP00390 522 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 HLA-DQB2P05538 268 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 ITIH2P19823 946 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 CHRNA3P32297 505 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 SERPINB6P35237 376 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ABL2P42684 1182 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 PPIDQ08752 370 aaKnown RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 PRKD1Q15139 912 aaPredicted RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 PLK5Q496M5 336 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 CARD16Q5EG05 197 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ARSIQ5FYB1 569 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 PLA2G2CQ5R387 149 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 PIP5KL1Q5T9C9 394 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms