RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 TOR1BO14657 336 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 SCAMP1O15126 338 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 DAPK3O43293 454 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 TM7SF2O76062 418 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 UGT2B4P06133 528 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 PLEKP08567 350 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 NFKBIAP25963 317 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 EPHB2P29323 1055 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 PTPN9P43378 593 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 UCNP55089 124 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 RHOAP61586 193 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 ELP6Q0PNE2 266 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 RTP5Q14D33 572 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 ESRP1Q6NXG1 681 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 ERAP2Q6P179 960 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 GDPD4Q6W3E5 623 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 ABI3BPQ7Z7G0 1075 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 ZNF248Q8NDW4 579 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 TMEM248Q9NWD8 314 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 FADS3Q9Y5Q0 445 aa13.46□□□□□ -0.25
CLSTN3-205ENST00000535452 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.26
CLSTN3-205ENST00000535452 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 TRIM38O00635 465 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 FGF10O15520 208 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CREB3O43889 395 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 ANXA6P08133 673 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CTSEP14091 401 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 JUNDP17535 347 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 SUOXP51687 545 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 YBEYP58557 167 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 ARF5P84085 180 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 INSM1Q01101 510 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 UBXN1Q04323 297 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 KRT31Q15323 416 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 NR0B2Q15466 257 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 PARP15Q460N3 678 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 TMEM259Q4ZIN3 620 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 FAXCQ5TGI0 409 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 GCNT7Q6ZNI0 430 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 PARS2Q7L3T8 475 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF683Q8IZ20 524 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 LMX1AQ8TE12 382 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 ARHGEF2Q92974 986 aaKnown RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 NAT6Q93015 286 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 NTAN1Q96AB6 310 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF578Q96N58 590 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 LENG8Q96PV6 779 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 SYNDIG1Q9H7V2 258 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 TMPRSS4Q9NRS4 437 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 THSD1Q9NS62 852 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CSNK1G3Q9Y6M4 447 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CABIN1Q9Y6J0 2220 aa13.45□□□□□ -0.26
CLSTN3-205ENST00000535452 CHD6Q8TD26 2715 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 PTPRBP23467 1997 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 SPTY2D1-AS1A0A0U1RR47 76 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 IGLON5A6NGN9 336 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 AQP9O43315 295 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 KDELR3O43731 214 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 BRINP1O60477 761 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 LRIG2O94898 1065 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 CSF2P04141 144 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 NME1P15531 152 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ACVRL1P37023 503 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 YPEL5P62699 121 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 MYL5Q02045 173 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 C19orf57Q0VDD7 668 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 STX1AQ16623 288 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 MYLK3Q32MK0 819 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF542PQ5EBM4 170 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 DCBLD1Q8N8Z6 715 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 FAM181AQ8N9Y4 354 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF548Q8NEK5 533 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 IFI44Q8TCB0 444 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 SLC20A1Q8WUM9 679 aa13.44□□□□□ -0.26
CLSTN3-205ENST00000535452 ASB12Q8WXK4 309 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms