RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 VPS45Q9NRW7 570 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 EVLQ9UI08 416 aaPredicted RBP23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 ATXN2Q99700 1313 aaKnown RBP23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 KRIT1O00522 736 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 ZNF806P0C7X5 589 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 CCZ1BP86790 482 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 CCZ1P86791 482 aaPredicted RBP23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 SLC10A2Q12908 348 aaPredicted RBP23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 SYCP2LQ5T4T6 812 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 PIP5KL1Q5T9C9 394 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 TMCO4Q5TGY1 634 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 SLC9A4Q6AI14 798 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 KATNAL2Q8IYT4 538 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 GPR161Q8N6U8 529 aaKnown RBP23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 PLD5Q8N7P1 536 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 TSEN2Q8NCE0 465 aaKnown RBP23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 LRIG1Q96JA1 1093 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 EXOC2Q96KP1 924 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 HDAC8Q9BY41 377 aa23.06■■□□□ 1.28
SFSWAP-204ENST00000535399 NYNRINQ9P2P1 1898 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 MACROD2A1Z1Q3 448 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 FAM47DPA6NHR8 397 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 LRRC72A6NJI9 287 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 MEI4A8MW99 385 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 INSIG1O15503 277 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 PLRG1O43660 514 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 MAP3K6O95382 1288 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 ITGB7P26010 798 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 MAOBP27338 520 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 HOXD12P35452 270 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 GARSP41250 739 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 DPP6P42658 865 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 CDKN2BP42772 138 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 RGRP47804 291 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 TAS2R38P59533 333 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 SLC10A7Q0GE19 358 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 LBRQ14739 615 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 SF3A2Q15428 464 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 WDR45BQ5MNZ6 344 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 KIAA0895LQ68EN5 471 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 ERN2Q76MJ5 926 aaKnown RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 KIAA2013Q8IYS2 634 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 KIAA1524Q8TCG1 905 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 CINPQ9BW66 212 aaPredicted RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 DYRK4Q9NR20 520 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 DTLQ9NZJ0 730 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 SEPT3Q9UH03 358 aa23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.05■■□□□ 1.28
SFSWAP-204ENST00000535399 MUSKO15146 869 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 IGHV4-34P06331 123 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 CTNNA1P35221 906 aaKnown RBP23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 ODF2Q5BJF6 829 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 ZNF805Q5CZA5 627 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 SPOCD1Q6ZMY3 1216 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 PRR23CQ6ZRP0 262 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 BIRC7Q96CA5 298 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 PPP1R16AQ96I34 528 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 PSKH2Q96QS6 385 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 OSBPL1AQ9BXW6 950 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 MAK16Q9BXY0 300 aaKnown RBP23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 KDM4CQ9H3R0 1056 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 PCDHA3Q9Y5H8 950 aa23.04■■□□□ 1.28
SFSWAP-204ENST00000535399 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 APOL1O14791 398 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 FSBPO95073 299 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 ZRANB2O95218 330 aaKnown RBP eCLIP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 UGT2B4P06133 528 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 CSNK1DP48730 415 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 RAD51Q06609 339 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 NSUN2Q08J23 767 aaKnown RBP eCLIP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 IFI16Q16666 785 aaKnown RBP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 TCEAL6Q6IPX3 200 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 PARS2Q7L3T8 475 aaKnown RBP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 RFX6Q8HWS3 928 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 RCOR2Q8IZ40 523 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 RGL4Q8IZJ4 473 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 TCEAL3Q969E4 200 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 TSGA13Q96PP4 275 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 ORAI3Q9BRQ5 295 aa23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 CPEB1Q9BZB8 566 aaKnown RBP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.03■■□□□ 1.28
SFSWAP-204ENST00000535399 ZFXP17010 805 aaPredicted RBP23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 MX2P20592 715 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 CTNNA2P26232 953 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 CCR5P51681 352 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 NEK3P51956 506 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 CCDC15Q0P6D6 951 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 GDPD4Q6W3E5 623 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 SRLQ86TD4 932 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 NT5DC3Q86UY8 548 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 PGBD5Q8N414 524 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 TEX26Q8N6G2 289 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 EXD1Q8NHP7 514 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 C1orf216Q8TAB5 229 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 MAML1Q92585 1016 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 FATE1Q969F0 183 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 KLHL32Q96NJ5 620 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 TSGA10Q9BZW7 698 aa23.02■■□□□ 1.28
SFSWAP-204ENST00000535399 EIF2B4Q9UI10 523 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms