RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ACADVLP49748 655 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 AIF1P55008 147 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 CLDN2P57739 230 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 ACAD10Q6JQN1 1059 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 PARS2Q7L3T8 475 aaKnown RBP16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 KANSL1Q7Z3B3 1105 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 PYROXD2Q8N2H3 581 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 RTL3Q8N8U3 475 aaKnown RBP16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 OR2AP1Q8NGE2 309 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 OR6K2Q8NGY2 324 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 RAB7BQ96AH8 199 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 EPAS1Q99814 870 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 CNPY3Q9BT09 278 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 SLC17A9Q9BYT1 436 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 FADS3Q9Y5Q0 445 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 HS3ST3A1Q9Y663 406 aa16.46■□□□□ 0.23
CLSTN3-204ENST00000535313 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 C16orf96A6NNT2 1141 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 A6NNZ2 444 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 KRIT1O00522 736 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 TSPAN6O43657 245 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 BUB1O43683 1085 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 CREB3O43889 395 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 POP4O95707 220 aaKnown RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 PAK4O96013 591 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 RPL7AP62424 266 aaKnown RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 SGCGQ13326 291 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 ILKQ13418 452 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 MYLK3Q32MK0 819 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 ANO6Q4KMQ2 910 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 ZNF805Q5CZA5 627 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 GCNT7Q6ZNI0 430 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 Q6ZSR6 202 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 PTAR1Q7Z6K3 402 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 ABI3BPQ7Z7G0 1075 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 DCP2Q8IU60 420 aaKnown RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 MCOLN2Q8IZK6 566 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 OR13H1Q8NG92 308 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 TSC1Q92574 1164 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 OSBPL1AQ9BXW6 950 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 CATSPERBQ9H7T0 1116 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 DKK4Q9UBT3 224 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 MYO6Q9UM54 1294 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 ARID1BQ8NFD5 2236 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 TRPM6Q9BX84 2022 aa16.45■□□□□ 0.22
CLSTN3-204ENST00000535313 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 UGT2B4P06133 528 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 DGKAP23743 735 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 GKP32189 559 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 YBEYP58557 167 aaPredicted RBP16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 RAD51Q06609 339 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 CAMK2BQ13554 666 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 FILIP1LQ4L180 1135 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 PPP1R15BQ5SWA1 713 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 SLC25A45Q8N413 288 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 CASKIN2Q8WXE0 1202 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 ARHGEF26Q96DR7 871 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 DONSONQ9NYP3 566 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 FZD10Q9ULW2 581 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
CLSTN3-204ENST00000535313 TRIM38O00635 465 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 FGF10O15520 208 aaPredicted RBP16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 TEX33O43247 280 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 SIGLEC6O43699 453 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 TMCC1O94876 653 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 IGSF6O95976 241 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 DAB2P98082 770 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 FGL2Q14314 439 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 PROX2Q3B8N5 592 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 PARP15Q460N3 678 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 ATXN7L2Q5T6C5 722 aaPredicted RBP16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 GDPD4Q6W3E5 623 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 KYAT3Q6YP21 454 aaKnown RBP16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 TMC6Q7Z403 805 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 SLC22A18ASQ8N1D0 253 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 IFT43Q96FT9 208 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 KLHL32Q96NJ5 620 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 BPIFA3Q9BQP9 254 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 NOL6Q9H6R4 1146 aaKnown RBP16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 PARVAQ9NVD7 372 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 DNAJC28Q9NX36 388 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 RAXQ9Y2V3 346 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 CHD5Q8TDI0 1954 aa16.43■□□□□ 0.22
CLSTN3-204ENST00000535313 LAMA5O15230 3695 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 NEMP2A6NFY4 417 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 IGLON5A6NGN9 336 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 WASH4PA8MWX3 477 aa16.42■□□□□ 0.22
CLSTN3-204ENST00000535313 TMCO5BA8MYB1 307 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms