RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PRRG4Q9BZD6 226 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 TGFB3P10600 412 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 PTPN4P29074 926 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 UGCGQ16739 394 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 JSRP1Q96MG2 331 aaPredicted RBP12.76□□□□□ -0.37
SPG11-203ENST00000535302 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
SPG11-203ENST00000535302 NMRAL1Q9HBL8 299 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 RTN3O95197 1032 aaPredicted RBP12.76□□□□□ -0.37
SPG11-203ENST00000535302 SERPINE1P05121 402 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
SPG11-203ENST00000535302 REXO5Q96IC2 774 aaKnown RBP12.76□□□□□ -0.37
SPG11-203ENST00000535302 NCAM2O15394 837 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 CLOCKO15516 846 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 SCN2BO60939 215 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 SLC25A12O75746 678 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ACADSP16219 412 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 IKBKEQ14164 716 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 AGMOQ6ZNB7 445 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 KRT73Q86Y46 540 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 HIPK1Q86Z02 1210 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 MAP4K3Q8IVH8 894 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 DNAJB14Q8TBM8 379 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 ABCB10Q9NRK6 738 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ARIH1Q9Y4X5 557 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 CTNNB1P35222 781 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 ARF1P84077 181 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 ELAVL2Q12926 359 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 CCDC153Q494R4 210 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 MCOLN3Q8TDD5 553 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 RORBQ92753 470 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 DBIP07108 87 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 CYP2A6P11509 494 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 SUSD6Q92537 303 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 FERD3LQ96RJ6 166 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 GAL3ST1Q99999 423 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ACAT2Q9BWD1 397 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 RXFP1Q9HBX9 757 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 EQTNQ9NQ60 294 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 L1RE1Q9UN81 338 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 GTPBP1O00178 669 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 AVILO75366 819 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 DBTP11182 482 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 FNBP1LQ5T0N5 605 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 GCNT7Q6ZNI0 430 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 SETD6Q8TBK2 473 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 TBCBQ99426 244 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 CRISPLD1Q9H336 500 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 OSER1Q9NX31 292 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ABCA9Q8IUA7 1624 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 A0A075B6Q4 140 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 CXCL11O14625 94 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ADCY6O43306 1168 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ZBTB14O43829 449 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 XYLBO75191 536 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 PRLRP16471 622 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 MAMLD1Q13495 774 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 RASAL3Q86YV0 1011 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 ARL10Q8N8L6 244 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 OPTCQ9UBM4 332 aa12.75□□□□□ -0.37
SPG11-203ENST00000535302 GPC6Q9Y625 555 aaPredicted RBP12.75□□□□□ -0.37
SPG11-203ENST00000535302 PRODHO43272 600 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PEX11AO75192 247 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 FUT4P22083 530 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 IL17AQ16552 155 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ARMC8Q8IUR7 673 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CXorf40AQ8TE69 158 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 TLR10Q9BXR5 811 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PORCNQ9H237 461 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ABCC13Q9NSE7 274 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 TNFSF13BQ9Y275 285 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 OR10H1Q9Y4A9 318 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PIGNO95427 931 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 FAM58BPP0C7Q3 252 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PTPN3P26045 913 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 RCVRNP35243 200 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 MARCKSL1P49006 195 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPG11-203ENST00000535302 KCNS3Q9BQ31 491 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 L2HGDHQ9H9P8 463 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms